RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ERVK-11Q9UQG0 969 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
CHMP2A-208ENST00000601220 SYNDIG1LA6NDD5 238 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 CLGNO14967 610 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 PHGDHO43175 533 aaKnown RBP16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 CASP2P42575 452 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 ILF2Q12905 390 aaKnown RBP16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 BMPR2Q13873 1038 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 EFTUD2Q15029 972 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 35.7
CHMP2A-208ENST00000601220 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 TBCCQ15814 346 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 ZNF750Q32MQ0 723 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 PDPRQ8NCN5 879 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 OR8K3Q8NH51 312 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 ASB5Q8WWX0 329 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 ASB15Q8WXK1 588 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 DAZLQ92904 295 aaKnown RBP16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 ANKRD9Q96BM1 317 aaPredicted RBP16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 SCYL1Q96KG9 808 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 GPR22Q99680 433 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 MAPKAP1Q9BPZ7 522 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 TTTY12Q9BZ98 90 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 CNOT10Q9H9A5 744 aaKnown RBP16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 LYRM4Q9HD34 91 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 WWOXQ9NZC7 414 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 CLCA3PQ9Y6N3 262 aa16.68■□□□□ 0.26
CHMP2A-208ENST00000601220 NKX2-6A6NCS4 301 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 FAM166BA8MTA8 275 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 CCDC188H7C350 402 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 FANCGO15287 622 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 SCELO95171 688 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 ETHE1O95571 254 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 IGHG3P01860 377 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 IFNA16P05015 189 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 CNR1P21554 472 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 ATP5A1P25705 553 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 SSTR1P30872 391 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 CHRNB4P30926 498 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 HPDP32754 393 aaPredicted RBP16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 RNF4P78317 190 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 FOXO1Q12778 655 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 GXYLT1Q4G148 440 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 RGS9BPQ6ZS82 235 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 CAPN12Q6ZSI9 719 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 CYS1Q717R9 158 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 SNX31Q8N9S9 440 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 OR14A16Q8NHC5 309 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 ZNF473Q8WTR7 871 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 CHTF18Q8WVB6 975 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 SREK1Q8WXA9 508 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 RND1Q92730 232 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 KIAA1191Q96A73 305 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 EFCAB11Q9BUY7 163 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 MS4A8Q9BY19 250 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
CHMP2A-208ENST00000601220 A0A1B0GVC2 190 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 G3V3Y1 287 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 RTCAO00442 366 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 LDB3O75112 727 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 MSX1P28360 303 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 GMPRP36959 345 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 SLC12A2P55011 1212 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 RIPPLY3P57055 190 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 NUP107P57740 925 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 ATP6V0D1P61421 351 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 MRPS25P82663 173 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 PCDH1Q08174 1060 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 PMPCAQ10713 525 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 STX4Q12846 297 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 CHIT1Q13231 466 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 RCN2Q14257 317 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 PDK4Q16654 411 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 HYAL4Q2M3T9 481 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 SPNS3Q6ZMD2 512 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 CDH24Q86UP0 819 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 CCDC71Q8IV32 467 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 ACOT4Q8N9L9 421 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 SLC2A12Q8TD20 617 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 ZNF721Q8TF20 911 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 KCNC2Q96PR1 638 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 RBBP8Q99708 897 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 TBCDQ9BTW9 1192 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 CD244Q9BZW8 370 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 OR8D2Q9GZM6 311 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 PNPLA3Q9NST1 481 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 LIPGQ9Y5X9 500 aa16.66■□□□□ 0.26
CHMP2A-208ENST00000601220 TCRBV9S1A1TA0A576 114 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 FAM159BA6NKW6 160 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 C17orf105B2RV13 164 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 NPIPA2E9PIF3 369 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 NPIPA3F8WFD2 350 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 IGLV3-21P80748 117 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 ID2Q02363 134 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 DLG1Q12959 904 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 LAPTM5Q13571 262 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 SERTAD2Q14140 314 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 NDUFAF5Q5TEU4 345 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 RTL6Q6ICC9 239 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 PAOXQ6QHF9 649 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms