RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 AP4B1Q9Y6B7 739 aa19.02■□□□□ 0.64
PNKP-214ENST00000600573 PDPK1O15530 556 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 IL1RNP18510 177 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 GPR3P46089 330 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 LSSP48449 732 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 VAC14Q08AM6 782 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 NDUFAF5Q5TEU4 345 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 PPP4R4Q6NUP7 873 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 NIPAL1Q6NVV3 410 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 ZZZ3Q8IYH5 903 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 MAML2Q8IZL2 1156 aaPredicted RBP19.01■□□□□ 0.63
PNKP-214ENST00000600573 FBXO30Q8TB52 745 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 GATA6Q92908 595 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 SLC47A1Q96FL8 570 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 ZDHHC12Q96GR4 267 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 TRAPPC9Q96Q05 1148 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 MAGIXQ9H6Y5 334 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 DCAF13Q9NV06 445 aaKnown RBP19.01■□□□□ 0.63
PNKP-214ENST00000600573 PHF11Q9UIL8 331 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 SNX11Q9Y5W9 270 aa19.01■□□□□ 0.63
PNKP-214ENST00000600573 ARHGEF17Q96PE2 2063 aaPredicted RBP19.01■□□□□ 0.63
PNKP-214ENST00000600573 H0YGG7 62 aa19■□□□□ 0.63
PNKP-214ENST00000600573 DEAF1O75398 565 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 UQCRC2P22695 453 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ALDH9A1P49189 494 aa19■□□□□ 0.63
PNKP-214ENST00000600573 PCBP4P57723 403 aaKnown RBP19■□□□□ 0.63
PNKP-214ENST00000600573 ARF3P61204 181 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 HBA1P69905 142 aa19■□□□□ 0.63
PNKP-214ENST00000600573 BTN3A2P78410 334 aa19■□□□□ 0.63
PNKP-214ENST00000600573 GAB1Q13480 694 aa19■□□□□ 0.63
PNKP-214ENST00000600573 PEAR1Q5VY43 1037 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 ZCCHC8Q6NZY4 707 aaKnown RBP19■□□□□ 0.63
PNKP-214ENST00000600573 FKBP9P1Q75LS8 142 aa19■□□□□ 0.63
PNKP-214ENST00000600573 EPHX4Q8IUS5 362 aa19■□□□□ 0.63
PNKP-214ENST00000600573 SAMD14Q8IZD0 417 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 EID3Q8N140 333 aa19■□□□□ 0.63
PNKP-214ENST00000600573 MARVELD2Q8N4S9 558 aa19■□□□□ 0.63
PNKP-214ENST00000600573 C19orf47Q8N9M1 422 aaKnown RBP19■□□□□ 0.63
PNKP-214ENST00000600573 OR6C4Q8NGE1 309 aa19■□□□□ 0.63
PNKP-214ENST00000600573 OR8K5Q8NH50 307 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ZFP28Q8NHY6 868 aa19■□□□□ 0.63
PNKP-214ENST00000600573 CEP76Q8TAP6 659 aa19■□□□□ 0.63
PNKP-214ENST00000600573 NECAB3Q96P71 396 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 BDH2Q9BUT1 245 aa19■□□□□ 0.63
PNKP-214ENST00000600573 EVA1BQ9NVM1 165 aa19■□□□□ 0.63
PNKP-214ENST00000600573 UCKL1Q9NWZ5 548 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ZSCAN32Q9NX65 697 aa19■□□□□ 0.63
PNKP-214ENST00000600573 CEP192Q8TEP8 1941 aa19■□□□□ 0.63
PNKP-214ENST00000600573 FAM149AA5PLN7 773 aa19■□□□□ 0.63
PNKP-214ENST00000600573 C6orf47O95873 294 aa19■□□□□ 0.63
PNKP-214ENST00000600573 GLB1P16278 677 aa19■□□□□ 0.63
PNKP-214ENST00000600573 MAGEA8P43361 318 aa19■□□□□ 0.63
PNKP-214ENST00000600573 MANFP55145 182 aaKnown RBP19■□□□□ 0.63
PNKP-214ENST00000600573 FADDQ13158 208 aa19■□□□□ 0.63
PNKP-214ENST00000600573 VEZF1Q14119 521 aa19■□□□□ 0.63
PNKP-214ENST00000600573 PDK3Q15120 406 aa19■□□□□ 0.63
PNKP-214ENST00000600573 NRF1Q16656 503 aa19■□□□□ 0.63
PNKP-214ENST00000600573 MPEG1Q2M385 716 aa19■□□□□ 0.63
PNKP-214ENST00000600573 VMACQ2NL98 169 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ENPP6Q6UWR7 440 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ZNF551Q7Z340 670 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 ZNF438Q7Z4V0 828 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ZNF761Q86XN6 746 aaPredicted RBP19■□□□□ 0.63
PNKP-214ENST00000600573 PHF6Q8IWS0 365 aaKnown RBP eCLIP19■□□□□ 0.63
PNKP-214ENST00000600573 DTWD2Q8NBA8 298 aa19■□□□□ 0.63
PNKP-214ENST00000600573 CCDC3Q9BQI4 270 aa19■□□□□ 0.63
PNKP-214ENST00000600573 OSBPL11Q9BXB4 747 aa19■□□□□ 0.63
PNKP-214ENST00000600573 LRIT1Q9P2V4 623 aa19■□□□□ 0.63
PNKP-214ENST00000600573 SCOCQ9UIL1 159 aa19■□□□□ 0.63
PNKP-214ENST00000600573 ERVK-11Q9UQG0 969 aa19■□□□□ 0.63
PNKP-214ENST00000600573 SLC22A7Q9Y694 548 aa19■□□□□ 0.63
PNKP-214ENST00000600573 VCANP13611 3396 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 PROM1O43490 865 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 B3GALT2O43825 422 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SDC3O75056 442 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SERPINA1P01009 418 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 UBTFL6P0CB48 400 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 ZNF888P0CJ79 500 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 ALPPL2P10696 532 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 CKMT2P17540 419 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 ALOX12P18054 663 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 TLX1P31314 330 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 BUD31P41223 144 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 RAB8AP61006 207 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SKP1P63208 163 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 ZNF528Q3MIS6 628 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SPRED1Q7Z699 444 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SLC25A45Q8N413 288 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 KCT2Q8NC54 265 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 OR52N2Q8NGI0 321 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 PSMA8Q8TAA3 256 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 CIDECQ96AQ7 238 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 MACROD1Q9BQ69 325 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 NPLQ9BXD5 320 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 LYRM4Q9HD34 91 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SLC35C2Q9NQQ7 365 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 GIMAP4Q9NUV9 329 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 TEX10Q9NXF1 929 aaPredicted RBP18.99■□□□□ 0.63
PNKP-214ENST00000600573 NLGN3Q9NZ94 848 aa18.99■□□□□ 0.63
PNKP-214ENST00000600573 SAMD4AQ9UPU9 718 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms