RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TSLPQ969D9 159 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 TLCD1Q96CP7 247 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 IMMP1LQ96LU5 166 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 LPAR4Q99677 370 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 SORBS1Q9BX66 1292 aaKnown RBP24.2■■□□□ 1.46
TRIM28-204ENST00000594806 LHPPQ9H008 270 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 ZNF160Q9HCG1 818 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 C5AR2Q9P296 337 aa24.2■■□□□ 1.46
TRIM28-204ENST00000594806 ARHGAP10A1A4S6 786 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 ALPPP05187 535 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 FGF4P08620 206 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 ITGA3P26006 1051 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 BUD31P41223 144 aaPredicted RBP24.19■■□□□ 1.46
TRIM28-204ENST00000594806 SLC13A2Q13183 592 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 EXT1Q16394 746 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 LACTB2Q53H82 288 aaPredicted RBP24.19■■□□□ 1.46
TRIM28-204ENST00000594806 SFT2D3Q587I9 215 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 TCHHL1Q5QJ38 904 aaPredicted RBP24.19■■□□□ 1.46
TRIM28-204ENST00000594806 JMJD6Q6NYC1 403 aaPredicted RBP24.19■■□□□ 1.46
TRIM28-204ENST00000594806 RNF165Q6ZSG1 346 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 CUZD1Q86UP6 607 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 OR6Y1Q8NGX8 325 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 KCNA7Q96RP8 456 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 SMAD5Q99717 465 aaKnown RBP24.19■■□□□ 1.46
TRIM28-204ENST00000594806 MRPL1Q9BYD6 325 aaKnown RBP24.19■■□□□ 1.46
TRIM28-204ENST00000594806 FBXW2Q9UKT8 454 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 ZNF451Q9Y4E5 1061 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 ASB4Q9Y574 426 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 COL6A6A6NMZ7 2263 aa24.19■■□□□ 1.46
TRIM28-204ENST00000594806 PIEZO2Q9H5I5 2752 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 GUCY1B2O75343 617 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 EEDO75530 441 aaKnown RBP24.18■■□□□ 1.46
TRIM28-204ENST00000594806 SNUPNO95149 360 aaKnown RBP24.18■■□□□ 1.46
TRIM28-204ENST00000594806 SERPINA7P05543 415 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 FAM58BPP0C7Q3 252 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 MAOAP21397 527 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 PPP2R1BP30154 601 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 PGDP52209 483 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 FOXA1P55317 472 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 TNFRSF17Q02223 184 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 TBL3Q12788 808 aaKnown RBP24.18■■□□□ 1.46
TRIM28-204ENST00000594806 SERTAD2Q14140 314 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 VWA5B1Q5TIE3 1220 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 PLAG1Q6DJT9 500 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 TRIM46Q7Z4K8 759 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 PARP9Q8IXQ6 854 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 EFCAB3Q8N7B9 438 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 TANKQ92844 425 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 CSF3RQ99062 836 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 MESP1Q9BRJ9 268 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 WDR41Q9HAD4 459 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 NECTIN3Q9NQS3 549 aa24.18■■□□□ 1.46
TRIM28-204ENST00000594806 A6NL46 340 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 AZIN1O14977 448 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 PROM1O43490 865 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 CHEK2O96017 543 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 KLK1P06870 262 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 MAGOHP61326 146 aaKnown RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 TERF2Q15554 542 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 SPIN4Q56A73 249 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 ARL13AQ5H913 290 aaPredicted RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 CCNYL2Q5T2Q4 361 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 PAPD4Q6PIY7 484 aaKnown RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 COMMD6Q7Z4G1 85 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 PPP1R14CQ8TAE6 165 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 CHTF18Q8WVB6 975 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 METTL2AQ96IZ6 378 aaKnown RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 THOC3Q96J01 351 aaKnown RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 WDR77Q9BQA1 342 aaPredicted RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 ACPTQ9BZG2 426 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 RPF2Q9H7B2 306 aaKnown RBP24.17■■□□□ 1.46
TRIM28-204ENST00000594806 ATMQ13315 3056 aa24.17■■□□□ 1.46
TRIM28-204ENST00000594806 ATRXP46100 2492 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 TMPRSS11DO60235 418 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 PRR35P0CG20 571 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 TPP2P29144 1249 aaPredicted RBP24.16■■□□□ 1.46
TRIM28-204ENST00000594806 HTR6P50406 440 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 HNRNPFP52597 415 aaKnown RBP24.16■■□□□ 1.46
TRIM28-204ENST00000594806 HNRNPH2P55795 449 aaKnown RBP24.16■■□□□ 1.46
TRIM28-204ENST00000594806 TRA2BP62995 288 aaKnown RBP24.16■■□□□ 1.46
TRIM28-204ENST00000594806 MPP2Q14168 576 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 CLYBLQ8N0X4 340 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 TMEM52Q8NDY8 209 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 M1APQ8TC57 530 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 HBEGFQ99075 208 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 NUDT9Q9BW91 350 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 ZNF552Q9H707 407 aaPredicted RBP24.16■■□□□ 1.46
TRIM28-204ENST00000594806 SIRT5Q9NXA8 310 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 TP53TG5Q9Y2B4 290 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 ATG4BQ9Y4P1 393 aa24.16■■□□□ 1.46
TRIM28-204ENST00000594806 TMEM120BA0PK00 339 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 SEC24DO94855 1032 aaPredicted RBP24.15■■□□□ 1.46
TRIM28-204ENST00000594806 SERPINE1P05121 402 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 GRK2P25098 689 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 MAPK12P53778 367 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 ACSM2AQ08AH3 577 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 Q0VFX4 171 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 STX4Q12846 297 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 AGAP7PQ5VUJ5 663 aa24.15■■□□□ 1.46
TRIM28-204ENST00000594806 ACSM2BQ68CK6 577 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms