RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RNF6Q9Y252 685 aa22.2■■□□□ 1.14
LSM4-202ENST00000593564 ZNF407Q9C0G0 2248 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 WWP2O00308 870 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 PIAS1O75925 651 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 CCDC166P0CW27 439 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 CD1DP15813 335 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 CD22P20273 847 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 RPL21P46778 160 aaKnown RBP22.19■■□□□ 1.14
LSM4-202ENST00000593564 KCNC1P48547 511 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 NR0B1P51843 470 aaKnown RBP22.19■■□□□ 1.14
LSM4-202ENST00000593564 HK2P52789 917 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 ATP6V0D1P61421 351 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 PLGLB1Q02325 96 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 STX4Q12846 297 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 TESK1Q15569 626 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 OR4D1Q15615 310 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 FBXO48Q5FWF7 155 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 EMC4Q5J8M3 183 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 PAGE2BQ5JRK9 111 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 CDH24Q86UP0 819 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 PDPRQ8NCN5 879 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 OR8K3Q8NH51 312 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 ESAMQ96AP7 390 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 KCNC2Q96PR1 638 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 F2RL3Q96RI0 385 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 KCNF1Q9H3M0 494 aa22.19■■□□□ 1.14
LSM4-202ENST00000593564 A0A0G2JMM0 328 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 A0A1W2PPB8 328 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 A0A1W2PRS3 328 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 KIR3DP1A8MWS1 328 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 PHGDHO43175 533 aaKnown RBP22.18■■□□□ 1.14
LSM4-202ENST00000593564 GLSO94925 669 aaPredicted RBP22.18■■□□□ 1.14
LSM4-202ENST00000593564 TFF3Q07654 80 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 LAPTM5Q13571 262 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 SERTAD2Q14140 314 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 TBCCQ15814 346 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 CAPN12Q6ZSI9 719 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 SLC22A16Q86VW1 577 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 RPRMLQ8N4K4 120 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 SRFBP1Q8NEF9 429 aaKnown RBP22.18■■□□□ 1.14
LSM4-202ENST00000593564 CDKL2Q92772 493 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 GPR22Q99680 433 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 TTTY12Q9BZ98 90 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 OR8D2Q9GZM6 311 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 NPDC1Q9NQX5 325 aaPredicted RBP22.18■■□□□ 1.14
LSM4-202ENST00000593564 PTBP2Q9UKA9 531 aaKnown RBP22.18■■□□□ 1.14
LSM4-202ENST00000593564 SNX24Q9Y343 169 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 SAR1BQ9Y6B6 198 aa22.18■■□□□ 1.14
LSM4-202ENST00000593564 MYOCOSA0A1B0GUC4 107 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 FAM166BA8MTA8 275 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 CXorf49A8MYA2 514 aaPredicted RBP22.17■■□□□ 1.14
LSM4-202ENST00000593564 C17orf105B2RV13 164 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 EPORP19235 508 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 HIST2H2ACQ16777 129 aaPredicted RBP22.17■■□□□ 1.14
LSM4-202ENST00000593564 NDUFAF5Q5TEU4 345 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 HIST2H2AA3Q6FI13 130 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 ZNF793Q6ZN11 406 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 RTL4Q6ZR62 310 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 GK5Q6ZS86 529 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 UBE3DQ7Z6J8 389 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 ZNF321PQ8N8H1 164 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 GOLM1Q8NBJ4 401 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 BBOF1Q8ND07 529 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 SLC2A12Q8TD20 617 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 PYROXD1Q8WU10 500 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 SCYL1Q96KG9 808 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 SGCZQ96LD1 299 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 CPNE1Q99829 537 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 FAM173AQ9BQD7 235 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 TBCDQ9BTW9 1192 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 CD274Q9NZQ7 290 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 TXNDC16Q9P2K2 825 aa22.17■■□□□ 1.14
LSM4-202ENST00000593564 DNAJC13O75165 2243 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 FAM90A27PA6NNH2 459 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 FOXO6A8MYZ6 492 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 TOXO94900 526 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 STMN1P16949 149 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 TNNI3P19429 210 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 CNR1P21554 472 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 ATP5A1P25705 553 aaKnown RBP22.16■■□□□ 1.14
LSM4-202ENST00000593564 CASP2P42575 452 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 RNF4P78317 190 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 IRF8Q02556 426 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 E2F2Q14209 437 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 ZNF750Q32MQ0 723 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 GXYLT1Q4G148 440 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 ACAD11Q709F0 780 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 OR5L2Q8NGL0 311 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 ZNF473Q8WTR7 871 aaKnown RBP22.16■■□□□ 1.14
LSM4-202ENST00000593564 SREK1Q8WXA9 508 aaKnown RBP22.16■■□□□ 1.14
LSM4-202ENST00000593564 UBXN10Q96LJ8 280 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 RBBP8Q99708 897 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 MAPKAP1Q9BPZ7 522 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 MS4A8Q9BY19 250 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 UCK2Q9BZX2 261 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 KCNJ16Q9NPI9 418 aa22.16■■□□□ 1.14
LSM4-202ENST00000593564 INTS1Q8N201 2190 aaKnown RBP22.15■■□□□ 1.14
LSM4-202ENST00000593564 SPG11Q96JI7 2443 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 NKX2-6A6NCS4 301 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 OR14I1A6ND48 311 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms