RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 FHP07954 510 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ZGLP1P0C6A0 271 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 RPL3P39023 403 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 HNRNPH2P55795 449 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 TAS2R50P59544 299 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 TNFRSF17Q02223 184 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 C2orf80Q0P641 193 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 BIKQ13323 160 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 NCF4Q15080 339 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 RPS6KA2Q15349 733 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 GSTA3Q16772 222 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 SYT16Q17RD7 645 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 CGB2Q6NT52 195 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ZNF595Q8IYB9 648 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 LIX1Q8N485 282 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 STT3BQ8TCJ2 826 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 TANKQ92844 425 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 OR52B2Q96RD2 323 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ELAC2Q9BQ52 826 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 TMEM120AQ9BXJ8 343 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 AKIRIN1Q9H9L7 192 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 MRGBPQ9NV56 204 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 GIMAP2Q9UG22 337 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 FARSAQ9Y285 508 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 DLGAP4Q9Y2H0 992 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ATG4BQ9Y4P1 393 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 NUP210LQ5VU65 1888 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 TPRP12270 2363 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ACACBO00763 2458 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 VSTM2BA6NLU5 285 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 CYR61O00622 381 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 DNAJB6O75190 326 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 IDO1P14902 403 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 DLSTP36957 453 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 HSD17B7P56937 341 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 KLC1Q07866 573 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 NKG7Q16617 165 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 NDUFAF5Q5TEU4 345 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 ZNF248Q8NDW4 579 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 STARD8Q92502 1023 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 EBF4Q9BQW3 602 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 C1orf50Q9BV19 199 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 DPH1Q9BZG8 443 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 FAM107BQ9H098 131 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 PCDHA9Q9Y5H5 950 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 SCN2AQ99250 2005 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 CCDC88CQ9P219 2028 aa13.13□□□□□ -0.31
CACNA1A-211ENST00000592864 SPEGQ15772 3267 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 A0A1W2PR48 441 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 PCDH17O14917 1159 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 PRMT3O60678 531 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 CTNSO60931 367 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 IGHEP01854 428 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 NR2F6P10588 404 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 SDC1P18827 310 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 COL9A2Q14055 689 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 VWA2Q5GFL6 755 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 FAM71E1Q6IPT2 247 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 FAM198BQ6UWH4 519 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 R3HCC1LQ7Z5L2 792 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 ZC3H7AQ8IWR0 971 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 MTERF3Q96E29 417 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 AIG1Q9NVV5 245 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 CTSFQ9UBX1 484 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 CROTQ9UKG9 612 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 MMACHCQ9Y4U1 282 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 PCDHGA6Q9Y5G7 932 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 CROCCQ5TZA2 2017 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 EPG5Q9HCE0 2579 aa13.12□□□□□ -0.31
CACNA1A-211ENST00000592864 FAM227AF5H4B4 570 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 SNX3O60493 162 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 B4GALT2O60909 372 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 FAM107AO95990 144 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 HEXBP07686 556 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 IL3P08700 152 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 G6PDP11413 515 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 PTPN4P29074 926 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 FOLR3P41439 243 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 CLDN8P56748 225 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 STX1BP61266 288 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 ACTN3Q08043 901 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 MFSD4BQ5TF39 518 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 OR52E8Q6IFG1 317 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 QSOX2Q6ZRP7 698 aa13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 SAMD14Q8IZD0 417 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 ENDOVQ8N8Q3 282 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-211ENST00000592864 FAM47BQ8NA70 645 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms