RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ANKRD10Q9NXR5 420 aa9.23□□□□□ -0.93
PTPN2-208ENST00000589216 MAP10Q9P2G4 905 aa9.23□□□□□ -0.93
PTPN2-208ENST00000589216 TMCO1Q9UM00 188 aa9.23□□□□□ -0.93
PTPN2-208ENST00000589216 MMACHCQ9Y4U1 282 aa9.23□□□□□ -0.93
PTPN2-208ENST00000589216 PCDHGA11Q9Y5H2 935 aa9.23□□□□□ -0.93
PTPN2-208ENST00000589216 ZGRF1Q86YA3 2104 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ARHGAP10A1A4S6 786 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 CLEC18AA5D8T8 446 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 WASHC1A8K0Z3 465 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 G3V2L1 256 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 PRKNO60260 465 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 KLHL41O60662 606 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 PROCP04070 461 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 RNF224P0DH78 156 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ATP5F1P24539 256 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 TSFMP43897 325 aaKnown RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 HSD17B7P56937 341 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 PMP22Q01453 160 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 KCNC4Q03721 635 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ACTN3Q08043 901 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 TGM3Q08188 693 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 EXT1Q16394 746 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ERCC6LQ2NKX8 1250 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 AP5B1Q2VPB7 878 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 SGO1Q5FBB7 561 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ACER2Q5QJU3 275 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 LGSNQ5TDP6 509 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ZNF468Q5VIY5 522 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ABHD17BQ5VST6 288 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 FRG2Q64ET8 278 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 OR4C11Q6IEV9 310 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 CLEC18BQ6UXF7 455 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 DGAT2L6Q6ZPD8 337 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 OR4N5Q8IXE1 308 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ZNF595Q8IYB9 648 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 C4orf33Q8N1A6 199 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ZNF321PQ8N8H1 164 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 CLEC18CQ8NCF0 446 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 OR1N1Q8NGS0 311 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 M1APQ8TC57 530 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ADAMTS18Q8TE60 1221 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 UCN3Q969E3 161 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ATP6V1E2Q96A05 226 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 RGMAQ96B86 450 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ANKRD9Q96BM1 317 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 SIGLEC12Q96PQ1 595 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 FRG2BQ96QU4 278 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 TAAR6Q96RI8 345 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 KCNA7Q96RP8 456 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 LMF1Q96S06 567 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 BARD1Q99728 777 aaKnown RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 MRPL1Q9BYD6 325 aaKnown RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 GSTO2Q9H4Y5 243 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 LYRM4Q9HD34 91 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 PNO1Q9NRX1 252 aaKnown RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 TEX10Q9NXF1 929 aaPredicted RBP9.22□□□□□ -0.93
PTPN2-208ENST00000589216 ATG4BQ9Y4P1 393 aa9.22□□□□□ -0.93
PTPN2-208ENST00000589216 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
PTPN2-208ENST00000589216 TRBV11-1A0A0K0K1C0 115 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 DYTNA2CJ06 578 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 OR5H15A6NDH6 313 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 GLOD5A6NK44 160 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 GABRR3A8MPY1 467 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 FOXE1O00358 373 aaPredicted RBP9.21□□□□□ -0.94
PTPN2-208ENST00000589216 UBFD1O14562 309 aaKnown RBP9.21□□□□□ -0.94
PTPN2-208ENST00000589216 PLIN3O60664 434 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 GLRA3O75311 464 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 SUPT7LO94864 414 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 AIFM1O95831 613 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 PDYNP01213 254 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 GSTA1P08263 222 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 NUDT17P0C025 328 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 ICAM2P13598 275 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 CHN1P15882 459 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 KRT15P19012 456 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 CPN2P22792 545 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 HPDP32754 393 aaPredicted RBP9.21□□□□□ -0.94
PTPN2-208ENST00000589216 GPR143P51810 404 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 TNFRSF17Q02223 184 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 CLCQ05315 142 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 SLAMF1Q13291 335 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 CUL3Q13618 768 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 TUBA3CQ13748 450 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 TLR1Q15399 786 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 NR6A1Q15406 480 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 MRM1Q6IN84 353 aaKnown RBP9.21□□□□□ -0.94
PTPN2-208ENST00000589216 WDR93Q6P2C0 686 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 TUBA3EQ6PEY2 450 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 ZYG11AQ6WRX3 759 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 C16orf47Q6ZP98 133 aaPredicted RBP9.21□□□□□ -0.94
PTPN2-208ENST00000589216 CHSY3Q70JA7 882 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 MILR1Q7Z6M3 343 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 LCA5Q86VQ0 697 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 ZNF227Q86WZ6 799 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 MMP21Q8N119 569 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 ZCCHC7Q8N3Z6 543 aaKnown RBP9.21□□□□□ -0.94
PTPN2-208ENST00000589216 CDYL2Q8N8U2 506 aa9.21□□□□□ -0.94
PTPN2-208ENST00000589216 GALNT11Q8NCW6 608 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms