RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SLC28A1O00337 649 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 CYR61O00622 381 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 RGS14O43566 566 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 CTNSO60931 367 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 MYO1DO94832 1006 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 ALPPP05187 535 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 KLK1P06870 262 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 UQCRHP07919 91 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAM58BPP0C7Q3 252 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 COX6A1P12074 109 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 ITGA3P26006 1051 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 MAPK12P53778 367 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 FOXA1P55317 472 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 EXT1Q16394 746 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 LINC00303Q3SY05 128 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 SPDYAQ5MJ70 313 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 SH2D4BQ5SQS7 431 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 CPZQ66K79 652 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 RIPOR1Q6ZS17 1223 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 COMMD6Q7Z4G1 85 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 GALNT16Q8N428 558 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 TANKQ92844 425 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 C8orf44Q96CB5 159 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 METTL2AQ96IZ6 378 aaKnown RBP12□□□□□ -0.49
TRAPPC1-206ENST00000573989 HBEGFQ99075 208 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 CCT7Q99832 543 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 SLC25A23Q9BV35 468 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 ACPTQ9BZG2 426 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 RPF2Q9H7B2 306 aaKnown RBP12□□□□□ -0.49
TRAPPC1-206ENST00000573989 KCMF1Q9P0J7 381 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 FIS1Q9Y3D6 152 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 TRAF6Q9Y4K3 522 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 PCDHGA9Q9Y5G4 932 aaKnown RBP12□□□□□ -0.49
TRAPPC1-206ENST00000573989 DOCK10Q96BY6 2186 aa12□□□□□ -0.49
TRAPPC1-206ENST00000573989 CROCCQ5TZA2 2017 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 PROM1O43490 865 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 EEDO75530 441 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 RSL1D1O76021 490 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 NR2F6P10588 404 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 MAOAP21397 527 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 SERPINB3P29508 390 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 GSTM5P46439 218 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 HTR6P50406 440 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 SOX8P57073 446 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 ABCE1P61221 599 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 TRA2BP62995 288 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 BTG2P78543 158 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 TNFRSF17Q02223 184 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 CHAF1BQ13112 559 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 SERTAD2Q14140 314 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 MPP2Q14168 576 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 SFT2D3Q587I9 215 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 KANK2Q63ZY3 851 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 ATG16L1Q676U5 607 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 CLEC6AQ6EIG7 209 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 MRM1Q6IN84 353 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 RNF165Q6ZSG1 346 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 LANCL3Q6ZV70 420 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 TRIM46Q7Z4K8 759 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMEM151BQ8IW70 566 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 SCUBE1Q8IWY4 988 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 PARP9Q8IXQ6 854 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 KBTBD2Q8IY47 623 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 C1orf52Q8N6N3 182 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 C9orf43Q8TAL5 461 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 RAB3IL1Q8TBN0 382 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 MGARPQ8TDB4 240 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 CHTF18Q8WVB6 975 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 TSLPQ969D9 159 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 ARL8AQ96BM9 186 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 CSF3RQ99062 836 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 SH3GL2Q99962 352 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAIM2Q9BWQ8 316 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZNF717Q9BY31 904 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 TRIM55Q9BYV6 548 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 ILKAPQ9H0C8 392 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZNF160Q9HCG1 818 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 GPR83Q9NYM4 423 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 MCM8Q9UJA3 840 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 PCDHGB7Q9Y5F8 929 aa11.99□□□□□ -0.49
TRAPPC1-206ENST00000573989 IGKV3D-11A0A0A0MRZ8 115 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 GNG14A0A1W2PPG7 69 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 TCRBV16S1A1N1A0A5B0 115 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 OR2W5A6NFC9 320 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 A6NL46 340 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 DYRK3O43781 588 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 CEACAM4O75871 244 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 DNAJB5O75953 348 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 GBAP04062 536 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 IFNA16P05015 189 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 CHRNGP07510 517 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 COX7A2P14406 83 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 BGNP21810 368 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 TPP2P29144 1249 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 SLC1A6P48664 564 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 PGDP52209 483 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 HNRNPH2P55795 449 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms