RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 OR1F2PQ96R84 312 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 WDR77Q9BQA1 342 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 ROGDIQ9GZN7 287 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 ILKAPQ9H0C8 392 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 CPNE5Q9HCH3 593 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 NECTIN3Q9NQS3 549 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 TEX10Q9NXF1 929 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 KCND3Q9UK17 655 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 ADAM29Q9UKF5 820 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 DLGAP4Q9Y2H0 992 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PTRH2Q9Y3E5 179 aaKnown RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 HS3ST3B1Q9Y662 390 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 USP24Q9UPU5 2620 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MDC1Q14676 2089 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 TPRP12270 2363 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 LOC102723996A0A087X1L8 192 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 ATP6AP2A0A1C7CYW4 349 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 A0A1W2PQ72 361 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 IDSB3KWA1 339 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 C9J4A7 227 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MASP2O00187 686 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 SLC28A1O00337 649 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 SDHDO14521 159 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 PGRMC2O15173 223 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 RRP8O43159 456 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 B3GALT2O43825 422 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 ATP6AP2O75787 350 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 CDC123O75794 336 aaPredicted RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 NEFHP12036 1026 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 RNH1P13489 461 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 ALOX15P16050 662 aaPredicted RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MMP11P24347 488 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 TIA1P31483 386 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 SOX18P35713 384 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 RAP1GDS1P52306 607 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 RPS15P62841 145 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 GUCY1A3Q02108 690 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 TGM3Q08188 693 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 SSPNQ14714 243 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 PDCD2Q16342 344 aaPredicted RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 UGT8Q16880 541 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 TUBB8Q3ZCM7 444 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 C6orf136Q5SQH8 315 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 VWA5B1Q5TIE3 1220 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 CGB2Q6NT52 195 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 LANCL3Q6ZV70 420 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 LARP4Q71RC2 724 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 CLNKQ7Z7G1 428 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 GPR180Q86V85 440 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 WDR75Q8IWA0 830 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 TRIM42Q8IWZ5 723 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 FAM47BQ8NA70 645 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 PLPP5Q8NEB5 264 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 C19orf60Q96EN9 201 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MAELQ96JY0 434 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MAGEB18Q96M61 343 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 NUF2Q9BZD4 464 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 CCDC134Q9H6E4 229 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MEAF6Q9HAF1 191 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 LRTM1Q9HBL6 345 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 C14orf105Q9NVL8 296 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 C1orf109Q9NX04 203 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 HEY2Q9UBP5 337 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MARCOQ9UEW3 520 aaPredicted RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MCM8Q9UJA3 840 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 C3orf18Q9UK00 162 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 NXT1Q9UKK6 140 aaKnown RBP8.5□□□□□ -1.05
HMG20A-209ENST00000559728 FBXW2Q9UKT8 454 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 CES1P1Q9UKY3 287 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 MKL2Q9ULH7 1088 aa8.5□□□□□ -1.05
HMG20A-209ENST00000559728 ACACAQ13085 2346 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 HDAC3O15379 428 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 RGS14O43566 566 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 PCDH7O60245 1069 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 FGF17O60258 216 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
HMG20A-209ENST00000559728 B4GALT2O60909 372 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 PEX11AO75192 247 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 CRCPO75575 148 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 AIFM1O95831 613 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 SDC1P18827 310 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 MAOAP21397 527 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 IL10P22301 178 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 PPP2R1BP30154 601 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 FOLR3P41439 243 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 EMP2P54851 167 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 TRA2BP62995 288 aaKnown RBP8.49□□□□□ -1.05
HMG20A-209ENST00000559728 IGLV3-21P80748 117 aaPredicted RBP8.49□□□□□ -1.05
HMG20A-209ENST00000559728 TNFRSF17Q02223 184 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 OCA2Q04671 838 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 CDC20Q12834 499 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 PCOLCEQ15113 449 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 SLC9B1Q4ZJI4 515 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 SPIN4Q56A73 249 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 HSP90B2PQ58FF3 399 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 CCNYL2Q5T2Q4 361 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 NOXRED1Q6NXP6 359 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 KIRREL2Q6UWL6 708 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 QSOX2Q6ZRP7 698 aa8.49□□□□□ -1.05
HMG20A-209ENST00000559728 FAM47EQ6ZV65 393 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms