RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	CCL21	O00585	134 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	CRYAB	P02511	175 aa	Known RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	FH	P07954	510 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	SNRPB2	P08579	225 aa	Known RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	ALOX12	P18054	663 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	CCND1	P24385	295 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	ECHS1	P30084	290 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	AP1S2	P56377	157 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	SLC26A5	P58743	744 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	OC90	Q02509	493 aa	Predicted RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PDIA2	Q13087	525 aa	Known RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	IKZF1	Q13422	519 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PWP1	Q13610	501 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	USP10	Q14694	798 aa	Known RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	HERC3	Q15034	1050 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	OR1C1	Q15619	314 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	TRADD	Q15628	312 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PPP1R3A	Q16821	1122 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	FBXO48	Q5FWF7	155 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	TOR1AIP1	Q5JTV8	583 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	STEAP4	Q687X5	459 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	FAM45BP	Q6NSW5	357 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	STRA8	Q7Z7C7	330 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	TMPRSS11B	Q86T26	416 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	RELL1	Q8IUW5	271 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	CEP97	Q8IW35	865 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	MDS2	Q8NDY4	140 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PLPP5	Q8NEB5	264 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	M1AP	Q8TC57	530 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	NT5C	Q8TCD5	201 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	FAM45A	Q8TCE6	357 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	ITLN2	Q8WWU7	325 aa	Predicted RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	SLC5A11	Q8WWX8	675 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	RELT	Q969Z4	430 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	TBC1D20	Q96BZ9	403 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	CCDC120	Q96HB5	630 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	ZNF354B	Q96LW1	612 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PTCHD1	Q96NR3	888 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	LPAR4	Q99677	370 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	UTP23	Q9BRU9	249 aa	Known RBP	6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	TRIM54	Q9BYV2	358 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	RNF32	Q9H0A6	362 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	CDCP1	Q9H5V8	836 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	NECTIN3	Q9NQS3	549 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	COPG2	Q9UBF2	871 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	TEKT2	Q9UIF3	430 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	NPIPA1	Q9UND3	350 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	SLC22A14	Q9Y267	594 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	CPAMD8	Q8IZJ3	1885 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	FBN2	P35556	2912 aa		6.55	□□□□□ -1.36
MARK3-215	ENST00000558787	PABPN1L	A6NDY0	278 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	NCF1B	A6NI72	391 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	GABRR3	A8MPY1	467 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	NCF1C	A8MVU1	366 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	CXorf49	A8MYA2	514 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787		E7ESA3	106 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	NEURL1	O76050	574 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	NCF1	P14598	390 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ZNF37A	P17032	561 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	TPP2	P29144	1249 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	PPP2R1B	P30154	601 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	AGTR2	P50052	363 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	AP2B1	P63010	937 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	BTN3A2	P78410	334 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	HSF1	Q00613	529 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	REEP5	Q00765	189 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	RGS1	Q08116	209 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	MGAT5	Q09328	741 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	RUNX2	Q13950	521 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	CDSN	Q15517	529 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	TSN	Q15631	228 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	INA	Q16352	499 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	EXT1	Q16394	746 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	C3AR1	Q16581	482 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	MAPKAPK3	Q16644	382 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	MEP1A	Q16819	746 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ZBTB37	Q5TC79	503 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ADNP2	Q6IQ32	1131 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	C3P1	Q6ZMU1	363 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	C16orf47	Q6ZP98	133 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	GALNTL5	Q7Z4T8	443 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	MRGPRG	Q86SM5	289 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ZC3HC1	Q86WB0	502 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	CCDC25	Q86WR0	208 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	RPS19BP1	Q86WX3	136 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ZNF227	Q86WZ6	799 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	TMEM52	Q8NDY8	209 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	FBXO36	Q8NEA4	188 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	NFAM1	Q8NET5	270 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	DNAJB8	Q8NHS0	232 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	GABPB2	Q8TAK5	448 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ELP5	Q8TE02	316 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	CREB3L4	Q8TEY5	395 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	AEN	Q8WTP8	325 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	THAP3	Q8WTV1	239 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ATL1	Q8WXF7	558 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	CAVIN3	Q969G5	261 aa		6.54	□□□□□ -1.36
MARK3-215	ENST00000558787	ESAM	Q96AP7	390 aa		6.54	□□□□□ -1.36

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