RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 FAM53BQ14153 422 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 HERC3Q15034 1050 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 PDCD2Q16342 344 aaPredicted RBP11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 SYT16Q17RD7 645 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 AP5B1Q2VPB7 878 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 NKAIN1Q4KMZ8 207 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 TMEM35AQ53FP2 167 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 SPDYAQ5MJ70 313 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 ABHD17CQ6PCB6 329 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 FAM47EQ6ZV65 393 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 UBE3DQ7Z6J8 389 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 PDSS2Q86YH6 399 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 AFAP1L2Q8N4X5 818 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 ESX1Q8N693 406 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 AMER3Q8N944 861 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 SRFBP1Q8NEF9 429 aaKnown RBP11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 OR5T3Q8NGG3 340 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 PROKR1Q8TCW9 393 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 GATA6Q92908 595 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 FGF11Q92914 225 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 RGMAQ96B86 450 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 MRPL1Q9BYD6 325 aaKnown RBP11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 ACPTQ9BZG2 426 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 CHST8Q9H2A9 424 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 TUBB1Q9H4B7 451 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 SLCO1B3Q9NPD5 702 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 LHX9Q9NQ69 397 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 HCN3Q9P1Z3 774 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 IFT80Q9P2H3 777 aaPredicted RBP11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 DNAJC15Q9Y5T4 150 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 SLC22A7Q9Y694 548 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 AKAP13Q12802 2813 aa11.37□□□□□ -0.59
HMGB1P8-201ENST00000558211 AHCTF1Q8WYP5 2266 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 SLC28A1O00337 649 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PLPP1O14494 284 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 KLF11O14901 512 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PIP5K1BO14986 540 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 DYRK3O43781 588 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 GALR3O60755 368 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 NSA2O95478 260 aaKnown RBP11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 GBAP04062 536 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 LIPCP11150 499 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PIM1P11309 404 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 ITGAXP20702 1163 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 CERS1P27544 350 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 GYS2P54840 703 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 OCRLQ01968 901 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 CSTF3Q12996 717 aaKnown RBP11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 CUL3Q13618 768 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 ADPRMQ3LIE5 342 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 UGT3A2Q3SY77 523 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 C10orf62Q5T681 223 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 OR4C11Q6IEV9 310 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PRMT9Q6P2P2 845 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 CRLF3Q8IUI8 442 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PRSS58Q8IYP2 241 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 SHISA5Q8N114 240 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 CT55Q8WUE5 264 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 NKD1Q969G9 470 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 RHOVQ96L33 236 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 LRFN5Q96NI6 719 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 KCNC2Q96PR1 638 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 GSX1Q9H4S2 264 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 BRF2Q9HAW0 419 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PRDM7Q9NQW5 492 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 NMRK1Q9NWW6 199 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 PSD3Q9NYI0 1048 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 AHSPQ9NZD4 102 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 TRPC4Q9UBN4 977 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 VPS29Q9UBQ0 182 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 NCOR2Q9Y618 2525 aa11.36□□□□□ -0.59
HMGB1P8-201ENST00000558211 CACNA1AO00555 2505 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 A0A088AWK7 358 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 LOC101059948A0A1B0GTJ6 334 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ATP6AP2A0A1C7CYW4 349 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 TCP11X1B4DZS4 312 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 C9J4A7 227 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 H0YIG0 161 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 CHST10O43529 356 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 RGS14O43566 566 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 B3GALT2O43825 422 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ATP6AP2O75787 350 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 SNUPNO95149 360 aaKnown RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 KLK1P06870 262 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 HSD3B1P14060 373 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ZNF10P21506 573 aaPredicted RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ATP5A1P25705 553 aaKnown RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 HSD3B2P26439 372 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 DNAJA1P31689 397 aaKnown RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 DLSTP36957 453 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 MTTPP55157 894 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 FOXL2P58012 376 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 SKP1P63208 163 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 RUNX2Q13950 521 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ERV3-1Q14264 604 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 GALNTL6Q49A17 601 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms