RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 HPSEQ9Y251 543 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 CA5BQ9Y2D0 317 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 C1orf167Q5SNV9 1468 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 UPK3BL1B0FP48 263 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 UPK3BL2E5RIL1 263 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SNX3O60493 162 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 HLA-DQB2P05538 268 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PRKCAP17252 672 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RPS15P62841 145 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PTGR1Q14914 329 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SPOCK2Q92563 424 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 CXorf21Q9HAI6 301 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 LSM5Q9Y4Y9 91 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PCDHAC2Q9Y5I4 1007 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TNS2Q63HR2 1409 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 BOLA2-SMG1P6H3BVE0 249 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 HTR3BO95264 441 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ESR1P03372 595 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 MAS1P04201 325 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ABOP16442 354 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 CHRNB4P30926 498 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RPS13P62277 151 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 MAB21L1Q13394 359 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 NFATC4Q14934 902 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 NPTX1Q15818 432 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RNF111Q6ZNA4 994 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 GPR155Q7Z3F1 870 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 GRASPQ7Z6J2 395 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PIAS4Q8N2W9 510 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 STON2Q8WXE9 905 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 OR2M4Q96R27 311 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 OR51B5Q9H339 312 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SLC32A1Q9H598 525 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ATP1B2P14415 290 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SLC18A2Q05940 514 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 DUSP28Q4G0W2 176 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PIGGQ5H8A4 983 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 DACT2Q5SW24 774 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SLC36A4Q6YBV0 504 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 LRRC52Q8N7C0 313 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 WDSUB1Q8N9V3 476 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 GALNT6Q8NCL4 622 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 NDNFQ8TB73 568 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 CMTM7Q96FZ5 175 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ITM2CQ9NQX7 267 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 ETV5P41161 510 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 SYT16Q17RD7 645 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 AAK1Q2M2I8 961 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 RBM15BQ8NDT2 890 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 CREB3L1Q96BA8 519 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 DYNLRB1Q9NP97 96 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 THUMPD1Q9NXG2 353 aaKnown RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 TP53TG5Q9Y2B4 290 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 FER1L4A9Z1Z3 1794 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 AIPO00170 330 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 IDH3AP50213 366 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 DUSP3P51452 185 aaPredicted RBP6.64□□□□□ -1.35
SYNE2-216ENST00000555002 OR56A3Q8NH54 315 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 PTCHD1Q96NR3 888 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 NENFQ9UMX5 172 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 MED16Q9Y2X0 877 aa6.64□□□□□ -1.35
SYNE2-216ENST00000555002 F5H0A9 414 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 POP7O75817 140 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OR2B3O76000 313 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ATE1O95260 518 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GPIP06744 558 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PTAFRP25105 342 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PAX6P26367 422 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 THBS2P35442 1172 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PIK3CBP42338 1070 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GABRA2P47869 451 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RAB30Q15771 203 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 BORAQ6PGQ7 559 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SMIM15Q7Z3B0 74 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TRABD2AQ86V40 505 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 C16orf78Q8WTQ4 265 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 KCTD13Q8WZ19 329 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RRNAD1Q96FB5 475 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 UNC93B1Q9H1C4 597 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ZDHHC3Q9NYG2 299 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CDK5RAP2Q96SN8 1893 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GLSO94925 669 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GPR149Q86SP6 731 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 BBS10Q8TAM1 723 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SMPDL3AQ92484 453 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PCED1BQ96HM7 432 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 P2RY13Q9BPV8 354 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ZBTB26Q9HCK0 441 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 DERAQ9Y315 318 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 DISP2A7MBM2 1401 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CLCA1A8K7I4 914 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 EEF1E1-BLOC1S5C9J1V9 151 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 WDPCPO95876 746 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 APLNRP35414 380 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CD97P48960 835 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 IL10RBQ08334 325 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms