RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PRSS38A1L453 326 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 hCG_2039718K7EN88 272 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 FOXE1O00358 373 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 BCAS1O75363 584 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 RPN2P04844 631 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SOAT1P35610 550 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 CRATP43155 626 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ASMTP46597 345 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 CYP27C1Q4G0S4 372 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 CCNYL2Q5T2Q4 361 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SPESP1Q6UW49 350 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 PLEKHG7Q6ZR37 379 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 TMEM179BQ7Z7N9 219 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SLC22A16Q86VW1 577 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 PTOV1Q86YD1 416 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 NAGSQ8N159 534 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 KRT78Q8N1N4 520 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 TMEM145Q8NBT3 493 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 PAPD5Q8NDF8 572 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 OR4E2Q8NGC2 313 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 PPCDCQ96CD2 204 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 FCRL4Q96PJ5 515 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 TMEM168Q9H0V1 697 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 REEP4Q9H6H4 257 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 DCAF13Q9NV06 445 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 FAM120CQ9NX05 1096 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 MAP4K5Q9Y4K4 846 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SNX8Q9Y5X2 465 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 PRKRAO75569 313 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 RASGRP1O95267 797 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 OPN1SWP03999 348 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 EIF2S1P05198 315 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ETFAP13804 333 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 CCR8P51685 355 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 PCDH1Q08174 1060 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ABHD18Q0P651 414 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ZNF846Q147U1 533 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 INTS11Q5TA45 600 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ZZZ3Q8IYH5 903 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ADGRF3Q8IZF5 1079 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 MFSD4AQ8N468 514 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 FBXL6Q8N531 539 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SETD7Q8WTS6 366 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SDCCAG3Q96C92 435 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 REXO5Q96IC2 774 aaKnown RBP11.14□□□□□ -0.63
SHMT2-212ENST00000554467 TPD52L3Q96J77 140 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 RAD21L1Q9H4I0 556 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 SYNPO2LQ9H987 977 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 ICKQ9UPZ9 632 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 NCKAP1Q9Y2A7 1128 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 CARD8Q9Y2G2 431 aa11.14□□□□□ -0.63
SHMT2-212ENST00000554467 GLOD5A6NK44 160 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SCELO95171 688 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 RASAL1O95294 804 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 KRT75O95678 551 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 FURINP09958 794 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 FCGR1AP12314 374 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 TRPC1P48995 793 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 HLCSP50747 726 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 RPS26P62854 115 aaKnown RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 AGERQ15109 404 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 RPE65Q16518 533 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 DPY19L1Q2PZI1 675 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SLC9B2Q86UD5 537 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 BPHLQ86WA6 291 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 METTL4Q8N3J2 472 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PATE1Q8WXA2 126 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 AIF1LQ9BQI0 150 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 BDH2Q9BUT1 245 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 KLHL31Q9H511 634 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 CFAP54Q96N23 3096 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 NINQ8N4C6 2090 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 TNFRSF1BP20333 461 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PTX3P26022 381 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 CAPGP40121 348 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SPRED1Q7Z699 444 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 GOLM1Q8NBJ4 401 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 OR2A1Q8NGT9 310 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 BMFQ96LC9 184 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 C17orf62Q9BQA9 187 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 UGT2B28Q9BY64 529 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 SLC6A16Q9GZN6 736 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 MIEF1Q9NQG6 463 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 VNN3Q9NY84 501 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 ABCG2Q9UNQ0 655 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 MDC1Q14676 2089 aaKnown RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 PRMT3O60678 531 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 DEAF1O75398 565 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-212ENST00000554467 ERGP11308 486 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 GABRG2P18507 467 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 RAB28P51157 221 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 CSNK1G2P78368 415 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 VMACQ2NL98 169 aa11.13□□□□□ -0.63
SHMT2-212ENST00000554467 UAP1L1Q3KQV9 507 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms