RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TPST1O60507 370 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PRKD3O94806 890 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 TBX6O95947 436 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SERPINA1P01009 418 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 CST1P01037 141 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 GHRHP01286 108 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 IGHV4-34P06331 123 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 IL3P08700 152 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 CHRM5P08912 532 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 CHRNB1P11230 501 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF23P17027 643 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ITGA2P17301 1181 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 CKMT2P17540 419 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 MYF6P23409 242 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PRIM2P49643 509 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 RAD23AP54725 363 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ARSFP54793 590 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 CLDN2P57739 230 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 HBA1P69905 142 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PLIN5Q00G26 463 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 RGS1Q08116 209 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 MERTKQ12866 999 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 IL18R1Q13478 541 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 DAG1Q14118 895 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 GNA13Q14344 377 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 NRF1Q16656 503 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SLC5A12Q1EHB4 618 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ALG11Q2TAA5 492 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SLC36A3Q495N2 470 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 KCTD21Q4G0X4 260 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ZC3H12BQ5HYM0 836 aaKnown RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 GCNT6Q5T4J0 391 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 TTC23Q5W5X9 447 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ADNP2Q6IQ32 1131 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 DUS1LQ6P1R4 473 aaKnown RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 IYDQ6PHW0 289 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 TMEM64Q6YI46 380 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 Q6ZSR6 202 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ADCK2Q7Z695 626 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PATL1Q86TB9 770 aaKnown RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PAQR7Q86WK9 346 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 CLECL1Q8IZS7 167 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 DHRSXQ8N5I4 330 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF655Q8N720 491 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 TSTD1Q8NFU3 115 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 OR5K1Q8NHB7 308 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 WDR48Q8TAF3 677 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 FBXO30Q8TB52 745 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 NT5CQ8TCD5 201 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 NETO1Q8TDF5 533 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 HMGB4Q8WW32 186 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 RASSF5Q8WWW0 418 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 LZICQ8WZA0 190 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 RSC1A1Q92681 617 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PDXPQ96GD0 296 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 F2RL3Q96RI0 385 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF347Q96SE7 839 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SLC29A1Q99808 456 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 DPH2Q9BQC3 489 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SLC35A5Q9BS91 424 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 DPH7Q9BTV6 452 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ADI1Q9BV57 179 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 MRPS26Q9BYN8 205 aaKnown RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 GABARAPL1Q9H0R8 117 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 EPB41L1Q9H4G0 881 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PIF1Q9H611 641 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 NTN4Q9HB63 628 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 TM9SF3Q9HD45 589 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 FZD3Q9NPG1 666 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SLC6A13Q9NSD5 602 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 MS4A12Q9NXJ0 267 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 TUBA8Q9NY65 449 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 WSB2Q9NYS7 404 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-221ENST00000553498 DLGAP2Q9P1A6 1054 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 WNT16Q9UBV4 365 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 EBF1Q9UH73 591 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 C3orf18Q9UK00 162 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PSME2Q9UL46 239 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 BTBD3Q9Y2F9 522 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 ORC6Q9Y5N6 252 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 GBF1Q92538 1859 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 LAMA2P24043 3122 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 IGKV1-8A0A0C4DH67 115 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 TMEM247A6NEH6 219 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SAC3D1A6NKF1 404 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 A8MVJ9 347 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 C2orf74A8MZ97 194 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ISM1B1AKI9 464 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 UPK1AO00322 258 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SOCS2O14508 198 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 YY2O15391 372 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ZSCAN9O15535 394 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ZW10O43264 779 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SUV39H1O43463 412 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 TNFRSF21O75509 655 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PDE9AO76083 593 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 KLHL18O94889 574 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SLITRK5O94991 958 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms