RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 RTP2Q5QGT7 225 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 TRMT11Q7Z4G4 463 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 WBP2Q969T9 261 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 FNDC11Q9BVV2 318 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 C3orf14Q9HBI5 128 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 NPAP1Q9NZP6 1156 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 GULP1Q9UBP9 304 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
PPFIA2-227ENST00000552948 MYLKQ15746 1914 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 B4DXG7 233 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 INMT-MINDY4F8WBC2 141 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 CSO75390 466 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 OR3A3P47888 321 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 P2RX3P56373 397 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF91Q05481 1191 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 GPR19Q15760 415 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC5A12Q1EHB4 618 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SYNPOQ8N3V7 929 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF557Q8N988 423 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC9A6Q92581 669 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 LRR1Q96L50 414 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 MED28Q9H204 178 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 LHX3Q9UBR4 397 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 LSM7Q9UK45 103 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SNX11Q9Y5W9 270 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ENPP4Q9Y6X5 453 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 TRBV4-1A0A0J9YWV2 114 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 PRKACBP22694 351 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 BUD31P41223 144 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 DSTNP60981 165 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 PSPHP78330 225 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 COX10Q12887 443 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 GPR17Q13304 367 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ZNF267Q14586 743 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 KCNA10Q16322 511 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 MED27Q6P2C8 311 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 MACC1Q6ZN28 852 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 OTOP2Q7RTS6 562 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 MARCH9Q86YJ5 346 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 POF1BQ8WVV4 589 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC12A9Q9BXP2 914 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 MKRN2Q9H000 416 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 HHATLQ9HCP6 504 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ASIC5Q9NY37 505 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ALG5Q9Y673 324 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 H7C4K7 107 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SYN3O14994 580 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SCO2O43819 266 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 DUSP11O75319 330 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SCO1O75880 301 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 NR2F1P10589 423 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 CELP19835 753 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 GINS1Q14691 196 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 CRB2Q5IJ48 1285 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 CNIH2Q6PI25 160 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 B3GLCTQ6Y288 498 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 PDZD3Q86UT5 571 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 OR6C4Q8NGE1 309 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 SDHCQ99643 169 aaPredicted RBP11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 BARHL1Q9BZE3 327 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 ING4Q9UNL4 249 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 PADI2Q9Y2J8 665 aa11.08□□□□□ -0.64
PPFIA2-227ENST00000552948 A0A075B6Q4 140 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 A0A0G2JN53 185 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 TSPAN4O14817 238 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 PRMT3O60678 531 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 NCR1O76036 304 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 H1F0P07305 194 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SRCP12931 536 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 ATF4P18848 351 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 CD9P21926 228 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 WNT3P56703 355 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 RAB14P61106 215 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 DUSP7Q16829 419 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 IDNKQ5T6J7 187 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 KIAA1161Q6NSJ0 714 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 XKRXQ6PP77 449 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 EXOSC8Q96B26 276 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SRRQ9GZT4 340 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SPRTNQ9H040 489 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 PPIL3Q9H2H8 161 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 RDH14Q9HBH5 336 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 GALNT9Q9HCQ5 603 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 A0A0G2JMZ2 1700 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 LRRC37A2A6NM11 1700 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SH3D21A4FU49 640 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 HPGDSO60760 199 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 TSPAN9O75954 239 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SCG5P05408 212 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 CSF3P09919 207 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 ATP1B2P14415 290 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SLC9A3P48764 834 aa11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 SNRPD1P62314 119 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-227ENST00000552948 MLLT1Q03111 559 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms