RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 SIRT5Q9NXA8 310 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 MS4A12Q9NXJ0 267 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 ZDHHC2Q9UIJ5 367 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 PHF11Q9UIL8 331 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 HAO1Q9UJM8 370 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
CDK4-212ENST00000552388 FIS1Q9Y3D6 152 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 RAP2CQ9Y3L5 183 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 MMACHCQ9Y4U1 282 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 CCL27Q9Y4X3 112 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 SPACA6W5XKT8 324 aa12.35□□□□□ -0.43
CDK4-212ENST00000552388 LOC102723996A0A087X1L8 192 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 BLACEA4D250 179 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 TMEM233B4DJY2 109 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 FAM227AF5H4B4 570 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 SLC28A1O00337 649 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 TMPRSS11DO60235 418 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 B4GALT2O60909 372 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 RSL1D1O76021 490 aaKnown RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 CHEK2O96017 543 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 C8orf89P0DMQ9 161 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 PRPH2P23942 346 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 TPP2P29144 1249 aaPredicted RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 HNRNPH2P55795 449 aaKnown RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 HSD17B7P56937 341 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 ATP1A4Q13733 1029 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 DEFB109BQ30KR1 87 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 SPIN4Q56A73 249 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 CYP20A1Q6UW02 462 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 KIRREL2Q6UWL6 708 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 COMMD6Q7Z4G1 85 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 GPR180Q86V85 440 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 ZNF595Q8IYB9 648 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 C1orf52Q8N6N3 182 aaKnown RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 ZNF781Q8N8C0 355 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 TMEM52Q8NDY8 209 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 TWIST2Q8WVJ9 160 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 METTL21AQ8WXB1 218 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 METTL2AQ96IZ6 378 aaKnown RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 VPS50Q96JG6 964 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 ILKAPQ9H0C8 392 aaPredicted RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 TUBB1Q9H4B7 451 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 MANSC1Q9H8J5 431 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 ZNF395Q9H8N7 513 aaPredicted RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 FBXW2Q9UKT8 454 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
CDK4-212ENST00000552388 MAN2B2Q9Y2E5 1009 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 ASB4Q9Y574 426 aa12.34□□□□□ -0.43
CDK4-212ENST00000552388 IGKV3D-11A0A0A0MRZ8 115 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 OR2W5A6NFC9 320 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PEX12O00623 359 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 CLDN4O14493 209 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 KLF11O14901 512 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PROM1O43490 865 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PRMT3O60678 531 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 SNNO75324 88 aaPredicted RBP12.33□□□□□ -0.44
CDK4-212ENST00000552388 GBAP04062 536 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 KLK1P06870 262 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 FAM58BPP0C7Q3 252 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 COX6A1P12074 109 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 ACPPP15309 386 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 CPN2P22792 545 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 BUD31P41223 144 aaPredicted RBP12.33□□□□□ -0.44
CDK4-212ENST00000552388 HNRNPFP52597 415 aaKnown RBP12.33□□□□□ -0.44
CDK4-212ENST00000552388 BTG2P78543 158 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 ACSM2AQ08AH3 577 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 CCNYL2Q5T2Q4 361 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 ATG16L1Q676U5 607 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 ACSM2BQ68CK6 577 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 BORAQ6PGQ7 559 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 Q6ZSR9 355 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 APLFQ8IW19 511 aaPredicted RBP12.33□□□□□ -0.44
CDK4-212ENST00000552388 SCUBE1Q8IWY4 988 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 KIRREL3Q8IZU9 778 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 TMEM102Q8N9M5 508 aaPredicted RBP12.33□□□□□ -0.44
CDK4-212ENST00000552388 FAM47BQ8NA70 645 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 OR11G2Q8NGC1 345 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 AGR3Q8TD06 166 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 APIPQ96GX9 242 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PTCHD1Q96NR3 888 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 CCT7Q99832 543 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 MESP1Q9BRJ9 268 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PRDM9Q9NQV7 894 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PRTFDC1Q9NRG1 225 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 THAP1Q9NVV9 213 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 C19orf25Q9UFG5 118 aaPredicted RBP12.33□□□□□ -0.44
CDK4-212ENST00000552388 MCM8Q9UJA3 840 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 ATG4BQ9Y4P1 393 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 CLDN16Q9Y5I7 305 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 PTGDR2Q9Y5Y4 395 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 KCNMB2Q9Y691 235 aa12.33□□□□□ -0.44
CDK4-212ENST00000552388 CPAMD8Q8IZJ3 1885 aa12.32□□□□□ -0.44
CDK4-212ENST00000552388 IGHV1-45A0A0A0MS14 117 aa12.32□□□□□ -0.44
CDK4-212ENST00000552388 A0A1W2PR48 441 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms