RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 STK16O75716 305 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 GADD45GO95257 159 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 HMGCLP35914 325 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 CSTF1Q05048 431 aaKnown RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 IL10RBQ08334 325 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 TIGD5Q53EQ6 642 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 MPPE1Q53F39 396 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 IFI44LQ53G44 452 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 RNASE12Q5GAN4 147 aaKnown RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 LAPTM4BQ86VI4 370 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 FAM46DQ8NEK8 389 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 BEST4Q8NFU0 473 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SPATA6Q9NWH7 488 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 SPATA2Q9UM82 520 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 CENPFP49454 3210 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 ADM5C9JUS6 153 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SLC25A14O95258 325 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 TPOP07202 933 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 HOXB9P17482 250 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 RGS4P49798 205 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SELENOWP63302 87 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 TAF1AQ15573 450 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 UBXN11Q5T124 520 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 NOXRED1Q6NXP6 359 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 TM9SF4Q92544 642 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SLC9A6Q92581 669 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 ZNF408Q9H9D4 720 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 NDUFB11Q9NX14 153 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SH3BP4Q9P0V3 963 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 LSM2Q9Y333 95 aaKnown RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 RNGTTO60942 597 aaKnown RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 EBLN1P0CF75 366 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 ETFAP13804 333 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 CXCL3P19876 107 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 ITGB7P26010 798 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 HTR7P34969 479 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 VSX2P58304 361 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 DCDC1P59894 354 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SERINC3Q13530 473 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 ZNF628Q5EBL2 1059 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 ZNF772Q68DY9 489 aaPredicted RBP12.12□□□□□ -0.47
SMG8-202ENST00000543872 GPR139Q6DWJ6 353 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 C11orf65Q8NCR3 313 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 GATAD2BQ8WXI9 593 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 AP3S1Q92572 193 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 PKP4Q99569 1192 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 TMEM43Q9BTV4 400 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 SLC6A17Q9H1V8 727 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 PIGUQ9H490 435 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 IFT46Q9NQC8 304 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 CDH10Q9Y6N8 788 aa12.12□□□□□ -0.47
SMG8-202ENST00000543872 COL4A5P29400 1685 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 CCDC88CQ9P219 2028 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 KPNA5O15131 536 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 SEC14L5O43304 696 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 MPC2O95563 127 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 EPOP01588 193 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 GSTM5P46439 218 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 CLCNKAP51800 687 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 CRYZQ08257 329 aaKnown RBP12.11□□□□□ -0.47
SMG8-202ENST00000543872 RBBP4Q09028 425 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 COX10Q12887 443 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 CASP12Q6UXS9 341 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 MOB2Q70IA6 237 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 SYNPOQ8N3V7 929 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 CLDN22Q8N7P3 220 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 OR11H7Q8NGC8 314 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 RANBP3Q9H6Z4 567 aaPredicted RBP12.11□□□□□ -0.47
SMG8-202ENST00000543872 PPP1R3EQ9H7J1 279 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ZFP64Q9NPA5 681 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 SLAMF7Q9NQ25 335 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 TVP23BQ9NYZ1 205 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
SMG8-202ENST00000543872 PADI2Q9Y2J8 665 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
SMG8-202ENST00000543872 RPS10-NUDT3A0A1W2PQS6 291 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 CBX4O00257 560 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 B3GAT3O94766 335 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 STOMP27105 288 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ALDH9A1P49189 494 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ERVK-21P61565 698 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ZNF91Q05481 1191 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 RIN1Q13671 783 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
SMG8-202ENST00000543872 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 ZNF730Q6ZMV8 503 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 IQCF1Q8N6M8 205 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 C2orf69Q8N8R5 385 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 MAPKAP1Q9BPZ7 522 aa12.11□□□□□ -0.47
SMG8-202ENST00000543872 NMNAT1Q9HAN9 279 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms