RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 EHD1Q9H4M9 534 aa18.45■□□□□ 0.54
DDX11-220ENST00000542244 ALG9Q9H6U8 611 aa18.45■□□□□ 0.54
DDX11-220ENST00000542244 NSMCE4AQ9NXX6 385 aa18.45■□□□□ 0.54
DDX11-220ENST00000542244 LIPGQ9Y5X9 500 aa18.45■□□□□ 0.54
DDX11-220ENST00000542244 LRRC14BA6NHZ5 514 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 WASHC1A8K0Z3 465 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 KLRC4-KLRK1H3BQV0 150 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 UBXN8O00124 270 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 HRKO00198 91 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 CLDN4O14493 209 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 PRRG2O14669 202 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 PRKRAO75569 313 aaKnown RBP18.44■□□□□ 0.54
DDX11-220ENST00000542244 TGFB1P01137 390 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 SLC35E2BP0CK96 405 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 STMN1P16949 149 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 ATP5A1P25705 553 aaKnown RBP18.44■□□□□ 0.54
DDX11-220ENST00000542244 MSH2P43246 934 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 ELAVL1Q15717 326 aaKnown RBP18.44■□□□□ 0.54
DDX11-220ENST00000542244 KBTBD12Q3ZCT8 623 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 C3orf62Q6ZUJ4 267 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 ISCA2Q86U28 154 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 ACBD4Q8NC06 268 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 PSD4Q8NDX1 1056 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 PHF10Q8WUB8 498 aaKnown RBP18.44■□□□□ 0.54
DDX11-220ENST00000542244 CPNE1Q99829 537 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 CD244Q9BZW8 370 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 UCK2Q9BZX2 261 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 OR8D2Q9GZM6 311 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 PLSCR2Q9NRY7 297 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 IGSF5Q9NSI5 407 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 WHRNQ9P202 907 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 MYOTQ9UBF9 498 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 TNFRSF10DQ9UBN6 386 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 VTI1BQ9UEU0 232 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 RNF112Q9ULX5 631 aa18.44■□□□□ 0.54
DDX11-220ENST00000542244 YARS2Q9Y2Z4 477 aaKnown RBP18.44■□□□□ 0.54
DDX11-220ENST00000542244 ADGRG4Q8IZF6 3080 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 CDK2AP1O14519 115 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 GP5P40197 560 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 RAB10P61026 200 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 IRF9Q00978 393 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 IRF8Q02556 426 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 ZDHHC24Q6UX98 284 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 CTAGE3PQ8IX95 158 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 TCAIMQ8N3R3 496 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 PPM1NQ8N819 430 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 ACOT4Q8N9L9 421 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 POGLUT1Q8NBL1 392 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 OR2M7Q8NG81 312 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 UCN3Q969E3 161 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 TSPAN17Q96FV3 270 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 SCYL1Q96KG9 808 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 ATOH8Q96SQ7 321 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 CAPS2Q9BXY5 557 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 OR51B5Q9H339 312 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 SEMA4BQ9NPR2 832 aaPredicted RBP18.43■□□□□ 0.54
DDX11-220ENST00000542244 ERVK-11Q9UQG0 969 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 TACC2O95359 2948 aa18.43■□□□□ 0.54
DDX11-220ENST00000542244 NKX2-6A6NCS4 301 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 A8MVJ9 347 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 FGF17O60258 216 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 CELA3AP09093 270 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 PCNAP12004 261 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 GSTM2P28161 218 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 ATP6V0D1P61421 351 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 E2F2Q14209 437 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 CDKL4Q5MAI5 379 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 CCDC71Q8IV32 467 aaPredicted RBP18.42■□□□□ 0.54
DDX11-220ENST00000542244 TMEM132CQ8N3T6 1108 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 SLC2A12Q8TD20 617 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 ZNF721Q8TF20 911 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 ASB15Q8WXK1 588 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 PPWD1Q96BP3 646 aaKnown RBP18.42■□□□□ 0.54
DDX11-220ENST00000542244 CCDC77Q9BR77 488 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 EFCAB11Q9BUY7 163 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 PITHD1Q9GZP4 211 aaPredicted RBP18.42■□□□□ 0.54
DDX11-220ENST00000542244 ENKD1Q9H0I2 346 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 RUBCNLQ9H714 662 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 CNOT10Q9H9A5 744 aaKnown RBP18.42■□□□□ 0.54
DDX11-220ENST00000542244 COPS7BQ9H9Q2 264 aaPredicted RBP18.42■□□□□ 0.54
DDX11-220ENST00000542244 TIMMDC1Q9NPL8 285 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 NPDC1Q9NQX5 325 aaPredicted RBP18.42■□□□□ 0.54
DDX11-220ENST00000542244 HPF1Q9NWY4 346 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 ITGB1BP2Q9UKP3 347 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 CLCA3PQ9Y6N3 262 aa18.42■□□□□ 0.54
DDX11-220ENST00000542244 FAM187AA6NFU0 413 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 C17orf105B2RV13 164 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 TUBB4AP04350 444 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 MTHFD2P13995 350 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 PLTPP55058 493 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 PPIAP62937 165 aaKnown RBP18.41■□□□□ 0.54
DDX11-220ENST00000542244 RNF4P78317 190 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 STX4Q12846 297 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 FAM219BQ5XKK7 198 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 C18orf63Q68DL7 685 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 HSDL2Q6YN16 418 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 FBXO25Q8TCJ0 367 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 FBF1Q8TES7 1133 aa18.41■□□□□ 0.54
DDX11-220ENST00000542244 KCTD4Q8WVF5 259 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms