RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LUZP2Q86TE4 346 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 TRAM1L1Q8N609 369 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 OR2A12Q8NGT7 310 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 KLHL6Q8WZ60 621 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 PIGKQ92643 395 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 PMEPA1Q969W9 287 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 IFT27Q9BW83 186 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 SLC6A13Q9NSD5 602 aa15.42■□□□□ 0.06
VARS2-212ENST00000542001 MID1O15344 667 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 MRPL3P09001 348 aaKnown RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 SLC35G6P0C7Q6 338 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 CMPK1P30085 196 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 CD83Q01151 205 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 PYCR3Q53H96 274 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 IDNKQ5T6J7 187 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 KHDRBS2Q5VWX1 349 aaKnown RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 TMEM107Q6UX40 140 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 MMP21Q8N119 569 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 C16orf78Q8WTQ4 265 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ARSGQ96EG1 525 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 DPH7Q9BTV6 452 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ASPNQ9BXN1 380 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 TIMP2P16035 220 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 POLR2CP19387 275 aaPredicted RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 C1orf61Q13536 156 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ZFP69Q49AA0 526 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 LIPIQ6XZB0 460 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 USP43Q70EL4 1123 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ZNF438Q7Z4V0 828 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 DCUN1D3Q8IWE4 304 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 COX18Q8N8Q8 333 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 OR6K6Q8NGW6 343 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 IPCEF1Q8WWN9 437 aaPredicted RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 ZNF514Q96K75 400 aaPredicted RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 PRR14Q9BWN1 585 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 EHD1Q9H4M9 534 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 PDFQ9HBH1 243 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 SLC25A37Q9NYZ2 338 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 STMN3Q9NZ72 180 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 P2RX2Q9UBL9 471 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 GRXCR1A8MXD5 290 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ARNTLO00327 626 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 KIAA0513O60268 411 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 PRMT3O60678 531 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 SLC9A3P48764 834 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 NKX3-2P78367 333 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 BIKQ13323 160 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ODF4Q2M2E3 257 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 ERN2Q76MJ5 926 aaKnown RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 LIMS2Q7Z4I7 341 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 TRNT1Q96Q11 434 aaKnown RBP15.41■□□□□ 0.06
VARS2-212ENST00000542001 NTMT1Q9BV86 223 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 LMAN2LQ9H0V9 348 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 FOCADQ5VW36 1801 aa15.41■□□□□ 0.06
VARS2-212ENST00000542001 F11P03951 625 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 GSTM2P28161 218 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 ITGA1P56199 1179 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 COX20Q5RI15 118 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 C11orf88Q6PI97 169 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 B3GLCTQ6Y288 498 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 PIGXQ8TBF5 258 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 RIPOR3Q96MK2 946 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 CUEDC1Q9NWM3 386 aaPredicted RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 PEX16Q9Y5Y5 336 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 BTN3A3O00478 584 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 PRKRAO75569 313 aaKnown RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 PSKH1P11801 424 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 CR2P20023 1033 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 MCCD1P59942 119 aaPredicted RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 ZNF630Q2M218 657 aaPredicted RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 ATAT1Q5SQI0 421 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 BCDIN3DQ7Z5W3 292 aaKnown RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 RAB43Q86YS6 212 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
VARS2-212ENST00000542001 SIX5Q8N196 739 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 OR51A7Q8NH64 312 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 QRSL1Q9H0R6 528 aaKnown RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 C11orf49Q9H6J7 331 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 TM7SF3Q9NS93 570 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 LY75O60449 1722 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 K7ESM1 405 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 TSPAN12O95859 305 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 SOX3P41225 446 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 SLC15A1P46059 708 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 CAPZA2P47755 286 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 SIM1P81133 766 aaPredicted RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 SLC3A1Q07837 685 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 SLAMF1Q13291 335 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 LARS2Q15031 903 aaKnown RBP15.4■□□□□ 0.06
VARS2-212ENST00000542001 UGT8Q16880 541 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 NXPE4Q6UWF7 544 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 ZNF852Q6ZMS4 543 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.4■□□□□ 0.06
VARS2-212ENST00000542001 AMBRA1Q9C0C7 1298 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 SLC6A16Q9GZN6 736 aa15.4■□□□□ 0.06
VARS2-212ENST00000542001 C2orf92A0A1B0GVN3 265 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 SOX30O94993 753 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ALPPP05187 535 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ASGR2P07307 311 aa15.39■□□□□ 0.05
VARS2-212ENST00000542001 ZNF10P21506 573 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms