RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 PCK2Q16822 640 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 EXOC3L2Q2M3D2 409 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ADPRMQ3LIE5 342 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 FAM153CQ494X1 144 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ARL13AQ5H913 290 aaPredicted RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 RABGAP1LQ5R372 815 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 VWA5B1Q5TIE3 1220 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SEL1L3Q68CR1 1132 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CAPRIN2Q6IMN6 1127 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 KIAA1161Q6NSJ0 714 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 FAM159AQ6UWV7 190 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 DPPA4Q7L190 304 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 IRF2BP2Q7Z5L9 587 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 HAPLN4Q86UW8 402 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 PAQR7Q86WK9 346 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 LAX1Q8IWV1 398 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 UBQLNLQ8IYU4 475 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CADM3Q8N126 398 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 GALNT16Q8N428 558 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ANKRD13CQ8N6S4 541 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 EXD3Q8N9H8 876 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 DNAAF3Q8N9W5 541 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 BOLLQ8N9W6 283 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 FAM47BQ8NA70 645 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 KIAA0895Q8NCT3 520 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TRPV1Q8NER1 839 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SPATA4Q8NEY3 305 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 OR4A16Q8NH70 328 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 WDR20Q8TBZ3 569 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 LPIN2Q92539 896 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 PIGKQ92643 395 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CDKL2Q92772 493 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 EMG1Q92979 244 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 RFKQ969G6 155 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SGK3Q96BR1 496 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 HAVCR1Q96D42 359 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 PBKQ96KB5 322 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CCDC17Q96LX7 622 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ACOX2Q99424 681 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CITED1Q99966 193 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 MXRA8Q9BRK3 442 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ALKBH7Q9BT30 221 aaPredicted RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TRMOQ9BU70 441 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SF3B5Q9BWJ5 86 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TDRD1Q9BXT4 1180 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TRPC7Q9HCX4 862 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 MMP25Q9NPA2 562 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 GPR173Q9NS66 373 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 DPP3Q9NY33 737 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CHMP5Q9NZZ3 219 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 NDUFA13Q9P0J0 144 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 FZD4Q9ULV1 537 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SH3GLB1Q9Y371 365 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 CHST2Q9Y4C5 530 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 SLCO1B1Q9Y6L6 691 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 ABCC4O15439 1325 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
AC055720.1-201ENST00000539552 TECTAO75443 2155 aa3.59□□□□□ -1.84
AC055720.1-201ENST00000539552 CELSR1Q9NYQ6 3014 aa3.59□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 A0A0J9YYE9 177 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 HEATR9A2RTY3 570 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ARHGEF35A5YM69 484 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ANKUB1A6NFN9 424 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 OR6C65A6NJZ3 312 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 GABRR3A8MPY1 467 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 VGLL3A8MV65 326 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF701M0R085 212 aaPredicted RBP3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 PSMD11O00231 422 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 MSI1O43347 362 aaKnown RBP3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 GRID2O43424 1007 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 FCMRO60667 390 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 PRAMEF2O60811 474 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 KCNJ13O60928 360 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF217O75362 1048 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 SAP30O75446 220 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 CBR3O75828 277 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 DFFBO76075 338 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 KLHL2O95198 593 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ACSL3O95573 720 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 NFATC1O95644 943 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 LDLRP01130 860 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 TRBC1P01850 177 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 MT-ND1P03886 318 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 CSN3P07498 182 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ZNF44P15621 663 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 CYP2B6P20813 491 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 PAICSP22234 425 aaKnown RBP3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 NMBRP28336 390 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 DLSTP36957 453 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ALDH3B1P43353 468 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 CDX1P47902 265 aaPredicted RBP3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 LHX1P48742 406 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 FNTAP49354 379 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 ACADVLP49748 655 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 MTCP1P56278 107 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 NUCB2P80303 420 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 CCZ1BP86790 482 aa3.58□□□□□ -1.84
AC055720.1-201ENST00000539552 CCZ1P86791 482 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms