RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ATP6V1HQ9UI12 483 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 GOLGA4Q13439 2230 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 FREM2Q5SZK8 3169 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ZFC3H1O60293 1989 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3DA0A087WVF3 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3IA0A087WXS9 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3EA0A087X179 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3KA0A087X1G2 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A1W2PR77 199 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3FA6NER0 549 aaPredicted RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3LB9A6J9 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DPM1O60762 260 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ULK1O75385 1050 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3HP0C7X1 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 RPS3P23396 243 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DNAJA1P31689 397 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 MC4RP32245 332 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 HK3P52790 923 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DGKQP52824 942 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DEFA1P59665 94 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 DEFA3P59666 94 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 S100A12P80511 92 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 CACNG1Q06432 222 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 NFE2L1Q14494 772 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ELAVL3Q14576 367 aaKnown RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 IHHQ14623 411 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 CLCA4Q14CN2 919 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 SHBQ15464 509 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TTLL9Q3SXZ7 439 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM174BQ3ZCQ3 159 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ZRANB3Q5FWF4 1079 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 LDLRAP1Q5SW96 308 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3GQ6DHY5 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3CQ6IPX1 549 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TBC1D3Q8IZP1 549 aaPredicted RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 AMER2Q8N7J2 671 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ZFP90Q8TF47 636 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 UBTD2Q8WUN7 234 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 RHBDF1Q96CC6 855 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ZHX1-C8orf76Q96EF9 292 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 OR52E6Q96RD3 313 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF300Q96RE9 604 aaPredicted RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 LRTM1Q9HBL6 345 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 TMEFF2Q9UIK5 374 aaPredicted RBP11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 SLC25A13Q9UJS0 675 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 IKZF3Q9UKT9 509 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 GPSM3Q9Y4H4 160 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 OARD1Q9Y530 152 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PCDHGA10Q9Y5H3 936 aa11.13□□□□□ -0.63
CHRNB1-202ENST00000536404 PTPRBP23467 1997 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 DOCK9Q9BZ29 2069 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 NBEAQ8NFP9 2946 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 WDFY3Q8IZQ1 3526 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 A0A1B0GTQ1 180 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PNMA8CA0A1B0GUJ8 204 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 OR7A17O14581 309 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PRMT5O14744 637 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 FFAR2O15552 330 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 KDELR3O43731 214 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 BNIP3LO60238 219 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PCDHGA12O60330 932 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM20BO75063 409 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CLDN11O75508 207 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 SERPINA1P01009 418 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 APOA1P02647 267 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 BMP4P12644 408 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 ACPPP15309 386 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF7P17097 686 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 EFNA1P20827 205 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 AGXTP21549 392 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 DGKAP23743 735 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PSMB9P28065 219 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CD38P28907 300 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 S100A3P33764 101 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CDH4P55283 916 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF45Q02386 682 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 TRAF3Q13114 568 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PTPRCAPQ14761 206 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 ADPRMQ3LIE5 342 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 RFTN2Q52LD8 501 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CCDC157Q569K6 752 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CDKL4Q5MAI5 379 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CTSL3PQ5NE16 218 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 AGAP6Q5VW22 663 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 CPZQ66K79 652 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 OR2T5Q6IEZ7 315 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 Q6ZVU0 165 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 GATAD2AQ86YP4 633 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 ZDHHC21Q8IVQ6 265 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 GALNT12Q8IXK2 581 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 Q8N9G6 341 aaPredicted RBP11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF540Q8NDQ6 660 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 KBTBD8Q8NFY9 601 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 OR52B6Q8NGF0 335 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 OR2T29Q8NH02 315 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 MCFD2Q8NI22 146 aa11.12□□□□□ -0.63
CHRNB1-202ENST00000536404 LHFPL5Q8TAF8 219 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms