RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 IGLV3-10A0A075B6K4 115 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 SAGE2PA6NJ88 616 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 OR7A17O14581 309 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 PRMT3O60678 531 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 NUDT7P0C024 238 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 TCF3P15923 654 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 RPS3P23396 243 aaKnown RBP eCLIP11.89□□□□□ -0.514e-6■■■■■ 40.4
RAD50-209ENST00000533482 CLCN7P51798 805 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 SBSNQ6UWP8 590 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 RAB43Q86YS6 212 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 OR9Q2Q8NGE9 314 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 OR2M4Q96R27 311 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 TTTY10Q9BZA0 68 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 PNO1Q9NRX1 252 aaKnown RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 SNX7Q9UNH6 387 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 ABLIM3O94929 683 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 IGLV3-25P01717 112 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 NTSR1P30989 418 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 HSD17B2P37059 387 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 MVKQ03426 396 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 KCNC3Q14003 757 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 SUZ12Q15022 739 aaKnown RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 KIAA1217Q5T5P2 1943 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 C6orf120Q7Z4R8 191 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 CHERPQ8IWX8 916 aaKnown RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 GOLM1Q8NBJ4 401 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 ZFP3Q96NJ6 502 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 TSSK6Q9BXA6 273 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 NEUROD4Q9HD90 331 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 GPR83Q9NYM4 423 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 HEBP2Q9Y5Z4 205 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 OR6C74A6NCV1 312 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 PRLP01236 227 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 VSX2P58304 361 aaPredicted RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 FAM78AQ5JUQ0 283 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 MPP7Q5T2T1 576 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 DCP2Q8IU60 420 aaKnown RBP11.89□□□□□ -0.51
RAD50-209ENST00000533482 PELI3Q8N2H9 469 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 OR6K6Q8NGW6 343 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 HEBP1Q9NRV9 189 aa11.89□□□□□ -0.51
RAD50-209ENST00000533482 RIIAD1A6NNX1 92 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 FAM155AB1AL88 458 aaPredicted RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 SCAMP2O15127 329 aaKnown RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 REM1O75628 298 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TNFP01375 233 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 IFNGP01579 166 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 AK4P27144 223 aaPredicted RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 KCNC4Q03721 635 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SCN1BQ07699 218 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 GINS1Q14691 196 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SMN1Q16637 294 aaKnown RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 DEFB110Q30KQ9 67 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 RUNDC3AQ59EK9 446 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 NXPE4Q6UWF7 544 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TRIM73Q86UV7 250 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SIX5Q8N196 739 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TTLQ8NG68 377 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 OR4C6Q8NH72 309 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 CFL2Q9Y281 166 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 DOCK5Q9H7D0 1870 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 H3BMQ9 156 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SLC16A5O15375 505 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 CDRT1O95170 752 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 ADH1BP00325 375 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 PRKAR1AP10644 381 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 IL1RNP18510 177 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 AHCYP23526 432 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TMBIM6P55061 237 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SLAMF1Q13291 335 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TUBA3CQ13748 450 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 CLCA4Q14CN2 919 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 VRK3Q8IV63 474 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 ZNF675Q8TD23 568 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 RFKQ969G6 155 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 COG8Q96MW5 612 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 ZNF583Q96ND8 569 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TRIB3Q96RU7 358 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TMED9Q9BVK6 235 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TIGARQ9NQ88 270 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 CALML5Q9NZT1 146 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 AKAP7Q9P0M2 348 aaPredicted RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 ACSL5Q9ULC5 683 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 PMF1-BGLAPU3KQ54 211 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SHROOM3Q8TF72 1996 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 H3BSH0 61 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SSNA1O43805 119 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SDC3O75056 442 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
RAD50-209ENST00000533482 PSMB5P28074 263 aa11.88□□□□□ -0.51
RAD50-209ENST00000533482 TRIM71Q2Q1W2 868 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms