RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 THUMPD3Q9BV44 507 aaKnown RBP17.54■□□□□ 0.4
SMPD1-208ENST00000533123 ERVK-11Q9UQG0 969 aa17.54■□□□□ 0.4
SMPD1-208ENST00000533123 A0A096LPI6 279 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 PRSS51A0A1B0GVH4 220 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SCN2BO60939 215 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 STAMBPO95630 424 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 C1QCP02747 245 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 HOXB9P17482 250 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SNRPNP63162 240 aaKnown RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 NHLH1Q02575 133 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SRSF11Q05519 484 aaKnown RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SPIDRQ14159 915 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 RUNDC3AQ59EK9 446 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 TOR1AIP1Q5JTV8 583 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 LRIF1Q5T3J3 769 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 LCN8Q6JVE9 175 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 UBE3DQ7Z6J8 389 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 PTRH1Q86Y79 214 aaKnown RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CLECL1Q8IZS7 167 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CAMKVQ8NCB2 501 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 KLHL6Q8WZ60 621 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 MS4A6EQ96DS6 147 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SLC41A2Q96JW4 573 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CDC6Q99741 560 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 C17orf62Q9BQA9 187 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SLC6A16Q9GZN6 736 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ZNF768Q9H5H4 540 aaKnown RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SIRT5Q9NXA8 310 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ACTR3BQ9P1U1 418 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 PDP2Q9P2J9 529 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SCN3AQ9NY46 2000 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ARHGAP10A1A4S6 786 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 C4orf51C9J302 202 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 D6RAR5 112 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 RFXANKO14593 260 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 AHCYL1O43865 530 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 PCSK2P16519 638 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 GABRA4P48169 554 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 RAB8AP61006 207 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 MC1RQ01726 317 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 RGS1Q08116 209 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 TRIP10Q15642 601 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 DPY19L1Q2PZI1 675 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ADPRMQ3LIE5 342 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 TMEM154Q6P9G4 183 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ARHGAP22Q7Z5H3 698 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 APLFQ8IW19 511 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 C10orf111Q8N326 155 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CSNK1A1LQ8N752 337 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 OR8J2Q8NGG1 315 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 OR10A6Q8NH74 314 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 NT5CQ8TCD5 201 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CCDC74BQ96LY2 380 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ZNF583Q96ND8 569 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 PKP2Q99959 881 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SH3GL3Q99963 347 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ECSITQ9BQ95 431 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CENPKQ9BS16 269 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 ZNF717Q9BY31 904 aaPredicted RBP17.53■□□□□ 0.4
SMPD1-208ENST00000533123 CHRNA10Q9GZZ6 450 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 SNX13Q9Y5W8 968 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 WDFY3Q8IZQ1 3526 aa17.53■□□□□ 0.4
SMPD1-208ENST00000533123 TOX3O15405 576 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-208ENST00000533123 ERI3O43414 337 aaKnown RBP17.52■□□□□ 0.4
SMPD1-208ENST00000533123 ERN1O75460 977 aaKnown RBP17.52■□□□□ 0.4
SMPD1-208ENST00000533123 NELFEP18615 380 aaKnown RBP17.52■□□□□ 0.4
SMPD1-208ENST00000533123 HPCAL1P37235 193 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 CPTPQ5TA50 214 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 MMP21Q8N119 569 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 D2HGDHQ8N465 521 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 C16orf78Q8WTQ4 265 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 RGMAQ96B86 450 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 DPYSL5Q9BPU6 564 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 CPPED1Q9BRF8 314 aaPredicted RBP17.52■□□□□ 0.4
SMPD1-208ENST00000533123 DUSP26Q9BV47 211 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 LHX9Q9NQ69 397 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 RIMS3Q9UJD0 308 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 PLCL2Q9UPR0 1127 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 CFAP54Q96N23 3096 aa17.52■□□□□ 0.4
SMPD1-208ENST00000533123 SRPX2O60687 465 aaPredicted RBP17.52■□□□□ 0.39
SMPD1-208ENST00000533123 SEMA3DO95025 777 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 FOLR1P15328 257 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 HTR1EP28566 365 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 TPP2P29144 1249 aaPredicted RBP17.52■□□□□ 0.39
SMPD1-208ENST00000533123 TAS2R50P59544 299 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 STXBP1P61764 594 aaKnown RBP17.52■□□□□ 0.39
SMPD1-208ENST00000533123 GPR19Q15760 415 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 TMEM35AQ53FP2 167 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF385BQ569K4 471 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 PHF19Q5T6S3 580 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 B3GNT8Q7Z7M8 397 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 KMT5CQ86Y97 462 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 SLITRK4Q8IW52 837 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 TMEM132CQ8N3T6 1108 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 OR2L5Q8NG80 312 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 ZCCHC10Q8TBK6 192 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 CANT1Q8WVQ1 401 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 PANX1Q96RD7 426 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 AHSPQ9NZD4 102 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms