RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 STX4Q12846 297 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 GGTA1PQ4G0N0 100 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 FRG2Q64ET8 278 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 TTC19Q6DKK2 380 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-222ENST00000532285 RPS19BP1Q86WX3 136 aaKnown RBP21.48■■□□□ 1.03
CAPN1-222ENST00000532285 TDRPQ86YL5 185 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 ZCCHC7Q8N3Z6 543 aaKnown RBP21.48■■□□□ 1.03
CAPN1-222ENST00000532285 KIF2BQ8N4N8 673 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 C7orf57Q8NEG2 295 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 B3GNT7Q8NFL0 401 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 GRHL3Q8TE85 626 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 MTFMTQ96DP5 389 aaKnown RBP21.48■■□□□ 1.03
CAPN1-222ENST00000532285 FRG2BQ96QU4 278 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 ERVK-6Q9BXR3 956 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 CDCP1Q9H5V8 836 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 FBXW2Q9UKT8 454 aa21.48■■□□□ 1.03
CAPN1-222ENST00000532285 CLEC18AA5D8T8 446 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 UBAP2LQ14157 1087 aaKnown RBP21.47■■□□□ 1.03
CAPN1-222ENST00000532285 NR6A1Q15406 480 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 ELAVL1Q15717 326 aaKnown RBP21.47■■□□□ 1.03
CAPN1-222ENST00000532285 INAQ16352 499 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 CLEC18BQ6UXF7 455 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 RPS27LQ71UM5 84 aaKnown RBP21.47■■□□□ 1.03
CAPN1-222ENST00000532285 GPR180Q86V85 440 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 CLEC18CQ8NCF0 446 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 MYRIPQ8NFW9 859 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 OR4F6Q8NGB9 312 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 SERPINI1Q99574 410 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 UTP23Q9BRU9 249 aaKnown RBP21.47■■□□□ 1.03
CAPN1-222ENST00000532285 ALOXE3Q9BYJ1 711 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 DEFB126Q9BYW3 111 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 VTI1BQ9UEU0 232 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 PHF11Q9UIL8 331 aa21.47■■□□□ 1.03
CAPN1-222ENST00000532285 PPIEQ9UNP9 301 aaKnown RBP21.47■■□□□ 1.03
CAPN1-222ENST00000532285 ASH1LQ9NR48 2969 aaKnown RBP21.47■■□□□ 1.03
CAPN1-222ENST00000532285 A0A1W2PPM1 405 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 DLX3O60479 287 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 PRAMEF2O60811 474 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 CBX6O95503 412 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 IFNA16P05015 189 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 ATP5F1P24539 256 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-222ENST00000532285 PPP2R1BP30154 601 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 TLX1P31314 330 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-222ENST00000532285 CLCN2P51788 898 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 CDH13P55290 713 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 IFT88Q13099 833 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 TUBA3CQ13748 450 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 SERTAD2Q14140 314 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 RASA2Q15283 850 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 TUBA3EQ6PEY2 450 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 FAM180AQ6UWF9 173 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 SLC22A9Q8IVM8 553 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 TMEM132CQ8N3T6 1108 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 APCDD1LQ8NCL9 501 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 FAR1Q8WVX9 515 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 VMP1Q96GC9 406 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 DDX31Q9H8H2 851 aaKnown RBP21.46■■□□□ 1.03
CAPN1-222ENST00000532285 CLCA3PQ9Y6N3 262 aa21.46■■□□□ 1.03
CAPN1-222ENST00000532285 COL12A1Q99715 3063 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 GABRR3A8MPY1 467 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 MAN1A2O60476 641 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 LDB3O75112 727 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 SEMA3DO95025 777 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 ETHE1O95571 254 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 KRT15P19012 456 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 IMPDH1P20839 514 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 BSGP35613 385 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 HSD17B3P37058 310 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 CD96P40200 585 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 SLCO1A2P46721 670 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 CLCQ05315 142 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 MRPL49Q13405 166 aaKnown RBP21.45■■□□□ 1.02
CAPN1-222ENST00000532285 ZNF678Q5SXM1 525 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 CYP20A1Q6UW02 462 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 ARMC10Q8N2F6 343 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 FAM26EQ8N5C1 309 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 BCORP1Q8N888 145 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 ZNF717Q9BY31 904 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-222ENST00000532285 ELOVL6Q9H5J4 265 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 RPF2Q9H7B2 306 aaKnown RBP21.45■■□□□ 1.02
CAPN1-222ENST00000532285 LYARQ9NX58 379 aaKnown RBP21.45■■□□□ 1.02
CAPN1-222ENST00000532285 PCDHGB6Q9Y5F9 930 aa21.45■■□□□ 1.02
CAPN1-222ENST00000532285 TRBV11-1A0A0K0K1C0 115 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 PPP6CO00743 305 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 GLRA3O75311 464 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 EEDO75530 441 aaKnown RBP21.44■■□□□ 1.02
CAPN1-222ENST00000532285 SUPT7LO94864 414 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 SLU7O95391 586 aaKnown RBP21.44■■□□□ 1.02
CAPN1-222ENST00000532285 BUD31P41223 144 aaPredicted RBP21.44■■□□□ 1.02
CAPN1-222ENST00000532285 GPR143P51810 404 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 PRKAA2P54646 552 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 MLF1P58340 268 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 VSNL1P62760 191 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 TNFRSF17Q02223 184 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 BIKQ13323 160 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 ELOAQ14241 798 aaKnown RBP21.44■■□□□ 1.02
CAPN1-222ENST00000532285 UNC50Q53HI1 259 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 ZNF766Q5HY98 468 aa21.44■■□□□ 1.02
CAPN1-222ENST00000532285 MRM1Q6IN84 353 aaKnown RBP21.44■■□□□ 1.02
CAPN1-222ENST00000532285 LETMD1Q6P1Q0 360 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms