RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 REPS1Q96D71 796 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 AIFM2Q9BRQ8 373 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 CMAHPQ9Y471 501 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 GRM6O15303 877 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 CDRT1O95170 752 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 GADD45GO95257 159 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 VLDLRP98155 873 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 POU4F3Q15319 338 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 NADSYN1Q6IA69 706 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
LTBP3-210ENST00000528516 GLCCI1Q86VQ1 547 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 ZSWIM9Q86XI8 627 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 OR10G2Q8NGC3 310 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 SIPA1Q96FS4 1042 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 SLC25A37Q9NYZ2 338 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 PSORS1C1Q9UIG5 152 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 NUP50Q9UKX7 468 aa17.16■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3DA0A087WVF3 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3IA0A087WXS9 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3EA0A087X179 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3KA0A087X1G2 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3FA6NER0 549 aaPredicted RBP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3LB9A6J9 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 LATO43561 262 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF623O75123 536 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 IFNW1P05000 195 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3HP0C7X1 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 HPGDP15428 266 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 NUDT1P36639 197 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TARDBPQ13148 414 aaKnown RBP eCLIP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CCDC157Q569K6 752 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3GQ6DHY5 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3CQ6IPX1 549 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TBC1D3Q8IZP1 549 aaPredicted RBP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 SLC37A3Q8NCC5 494 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 ARRDC2Q8TBH0 407 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 ZCCHC10Q8TBK6 192 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CD244Q9BZW8 370 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 STOML2Q9UJZ1 356 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF225Q9UK10 706 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 FCER2P06734 321 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 IL32P24001 234 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 SOX3P41225 446 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 TAS2R50P59544 299 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 AGTRAPQ6RW13 159 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 NXPE1Q8N323 547 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CSGALNACT1Q8TDX6 532 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 AKAP1Q92667 903 aaKnown RBP eCLIP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 NT5C3BQ969T7 300 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 SLC22A12Q96S37 553 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 SLC35A5Q9BS91 424 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CLEC4MQ9H2X3 399 aaPredicted RBP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 DEC1Q9P2X7 70 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 COMMD3Q9UBI1 195 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 SSR3Q9UNL2 185 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 MMP20O60882 483 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CCNDBP1O95273 360 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 DDCP20711 480 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 GZMKP49863 264 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CXorf57Q6NSI4 855 aaKnown RBP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 FAM171BQ6P995 826 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 DNAJC22Q8N4W6 341 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 NFKBIDQ8NI38 313 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 ERVW-1Q9UQF0 538 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 B4DXG7 233 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 PRPS2P11908 318 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 AP2S1P53680 142 aaPredicted RBP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 STK11Q15831 433 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 C2orf27AQ580R0 203 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 GCNT6Q5T4J0 391 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CCDC149Q6ZUS6 474 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 MEX3DQ86XN8 651 aaKnown RBP17.15■□□□□ 0.34
LTBP3-210ENST00000528516 C1orf74Q96LT6 269 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 SPATA9Q9BWV2 254 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 MAPRE3Q9UPY8 281 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 AP3M1Q9Y2T2 418 aa17.15■□□□□ 0.34
LTBP3-210ENST00000528516 CASKO14936 926 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 TSPAN6O43657 245 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 NUDT14O95848 222 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 C6orf47O95873 294 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 EPOP01588 193 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 PRKAR1AP10644 381 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 NKX3-2P78367 333 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 PCDH1Q08174 1060 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 GPR19Q15760 415 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 FLYWCH1Q4VC44 716 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 RUNDC3AQ59EK9 446 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 FEVQ99581 238 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 GAL3ST1Q99999 423 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 IL26Q9NPH9 171 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ZDHHC3Q9NYG2 299 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 DNAJC27Q9NZQ0 273 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ALG5Q9Y673 324 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 ARID2Q68CP9 1835 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 A0A1W2PRB8 838 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 GFRA2O00451 464 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 B3GALT4O96024 378 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 C9P02748 559 aa17.14■□□□□ 0.33
LTBP3-210ENST00000528516 TALDO1P37837 337 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms