RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 LOC102723996A0A087X1L8 192 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 PROM1O43490 865 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 ALOX12BO75342 701 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 LINC00032P0C843 101 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 ATXN8OSP0DMR3 200 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 ACPPP15309 386 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 CPN2P22792 545 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 TIA1P31483 386 aaKnown RBP eCLIP19.53■□□□□ 0.72
CD44-222ENST00000526025 BUD31P41223 144 aaPredicted RBP19.53■□□□□ 0.72
CD44-222ENST00000526025 MAPK12P53778 367 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 HNRNPH2P55795 449 aaKnown RBP19.53■□□□□ 0.72
CD44-222ENST00000526025 ERV3-1Q14264 604 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 KIAA0040Q15053 153 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 MINDY4Q4G0A6 757 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 SPDYAQ5MJ70 313 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 FAM69BQ5VUD6 431 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 SHISA6Q6ZSJ9 500 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 MRGPREQ86SM8 312 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 SCUBE1Q8IWY4 988 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 PRSS58Q8IYP2 241 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 LRRC34Q8IZ02 419 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 OR2T11Q8NH01 316 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 METTL21AQ8WXB1 218 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 C19orf60Q96EN9 201 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 FCRL1Q96LA6 429 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 PPP3R2Q96LZ3 170 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 PRORYQ9H606 182 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 LRTM1Q9HBL6 345 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 RIC8BQ9NVN3 520 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 VTI1BQ9UEU0 232 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 C19orf25Q9UFG5 118 aaPredicted RBP19.53■□□□□ 0.72
CD44-222ENST00000526025 PTGDR2Q9Y5Y4 395 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 HS3ST3B1Q9Y662 390 aa19.53■□□□□ 0.72
CD44-222ENST00000526025 DSPP15924 2871 aaKnown RBP19.52■□□□□ 0.72
CD44-222ENST00000526025 IGKV3D-11A0A0A0MRZ8 115 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 CDC14CA4D256 554 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 LSM1O15116 133 aaKnown RBP19.52■□□□□ 0.72
CD44-222ENST00000526025 PCDH7O60245 1069 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 PRMT3O60678 531 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 CTNSO60931 367 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 MYO1DO94832 1006 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 C8orf89P0DMQ9 161 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 PPP2R1BP30154 601 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 OTX2P32243 289 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 EFNA3P52797 238 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 FOXL2P58012 376 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 RAE1P78406 368 aaKnown RBP19.52■□□□□ 0.72
CD44-222ENST00000526025 NR6A1Q15406 480 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 SMU1Q2TAY7 513 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 SHISA5Q8N114 240 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 EFCAB3Q8N7B9 438 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 CSF3RQ99062 836 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 RBCK1Q9BYM8 510 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 WDR41Q9HAD4 459 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 FBXW2Q9UKT8 454 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 ATG4BQ9Y4P1 393 aa19.52■□□□□ 0.72
CD44-222ENST00000526025 CFAP47Q6ZTR5 3102 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 FAM227AF5H4B4 570 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 PEX12O00623 359 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 SOCS6O14544 535 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 B4GALT2O60909 372 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 SKAP2O75563 359 aaPredicted RBP19.51■□□□□ 0.71
CD44-222ENST00000526025 FURINP09958 794 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 NR2F6P10588 404 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 CXADRP78310 365 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 BTKQ06187 659 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 BIKQ13323 160 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 MFSD4BQ5TF39 518 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 CRLF3Q8IUI8 442 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 TMEM151BQ8IW70 566 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 FAM47BQ8NA70 645 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 PIWIL2Q8TC59 973 aaKnown RBP19.51■□□□□ 0.71
CD44-222ENST00000526025 TANKQ92844 425 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 RPF2Q9H7B2 306 aaKnown RBP19.51■□□□□ 0.71
CD44-222ENST00000526025 PRTFDC1Q9NRG1 225 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 PNPOQ9NVS9 261 aa19.51■□□□□ 0.71
CD44-222ENST00000526025 PCSK5Q92824 1860 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 A0A1W2PR48 441 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 TCRBV16S1A1N1A0A5B0 115 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 HDAC3O15379 428 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 VPS4BO75351 444 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 SEC22BO75396 215 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 CDC123O75794 336 aaPredicted RBP19.5■□□□□ 0.71
CD44-222ENST00000526025 GBAP04062 536 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 ITGB2P05107 769 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 PRKAR1AP10644 381 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 ZNF763Q0D2J5 394 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 NSDHLQ15738 373 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 ATP6AP1LQ52LC2 224 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 OR52E8Q6IFG1 317 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 NOXRED1Q6NXP6 359 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 KIRREL2Q6UWL6 708 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 TMEM52Q8NDY8 209 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 TM4SF18Q96CE8 201 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 FAIM2Q9BWQ8 316 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 MEAF6Q9HAF1 191 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 P4HTMQ9NXG6 502 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 CROCCQ5TZA2 2017 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 CACNA1GO43497 2377 aa19.5■□□□□ 0.71
CD44-222ENST00000526025 MED13Q9UHV7 2174 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms