RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SSR2P43308 183 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ZFP36L2P47974 494 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 LIM2P55344 173 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 RPL38P63173 70 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 GNGT1P63211 74 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 RGS1Q08116 209 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 CSTF3Q12996 717 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 SLAMF1Q13291 335 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 CUL3Q13618 768 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 IL10RAQ13651 578 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 FAM53BQ14153 422 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 NAA25Q14CX7 972 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 NKG7Q16617 165 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 MUM1Q2TAK8 710 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 AP5B1Q2VPB7 878 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 LSM12Q3MHD2 195 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 GALNTL6Q49A17 601 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 SPDYAQ5MJ70 313 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 C6orf136Q5SQH8 315 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ARHGAP40Q5TG30 622 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 GARNL3Q5VVW2 1013 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 MLIPQ5VWP3 458 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ATG16L1Q676U5 607 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 FAAH2Q6GMR7 532 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 EPGNQ6UW88 154 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 RNF165Q6ZSG1 346 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 LANCL3Q6ZV70 420 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 LARP4Q71RC2 724 aaKnown RBP eCLIP6.11□□□□□ -1.43
CD44-214ENST00000525211 OVCH1Q7RTY7 1134 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 CLNKQ7Z7G1 428 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ATCAYQ86WG3 371 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 CACNA2D3Q8IZS8 1091 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 KRTCAP2Q8N6L1 136 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ENDOVQ8N8Q3 282 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 SIMC1Q8NDZ2 872 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 TTLQ8NG68 377 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 OR51Q1Q8NH59 317 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.11□□□□□ -1.43
CD44-214ENST00000525211 STT3BQ8TCJ2 826 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 C16orf78Q8WTQ4 265 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 GFM2Q969S9 779 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 UBE2E3Q969T4 207 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 RGMAQ96B86 450 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ANKRD9Q96BM1 317 aaPredicted RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 C19orf60Q96EN9 201 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 MAELQ96JY0 434 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 SERPINI1Q99574 410 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 MEAF6Q9HAF1 191 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 BRF2Q9HAW0 419 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 FANCEQ9HB96 536 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 LRTM1Q9HBL6 345 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 EML4Q9HC35 981 aaKnown RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 ZNF304Q9HCX3 659 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 PSD3Q9NYI0 1048 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 AKAP7Q9P0M2 348 aaPredicted RBP6.11□□□□□ -1.43
CD44-214ENST00000525211 TRPC4Q9UBN4 977 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 VPS29Q9UBQ0 182 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ACSL6Q9UKU0 697 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ANGPTL2Q9UKU9 493 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 PPT2Q9UMR5 302 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 ERVK-11Q9UQG0 969 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 RAXQ9Y2V3 346 aa6.11□□□□□ -1.43
CD44-214ENST00000525211 URB1O60287 2271 aaKnown RBP6.1□□□□□ -1.43
CD44-214ENST00000525211 IGLV3-12A0A075B6K2 115 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.1□□□□□ -1.43
CD44-214ENST00000525211 SLC28A1O00337 649 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 ANKRD28O15084 1053 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 HDAC3O15379 428 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 NKX2-8O15522 239 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 PROM1O43490 865 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 AKAP10O43572 662 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 PCDH7O60245 1069 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 FGF17O60258 216 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 LDB3O75112 727 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 SEC22BO75396 215 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 SEMA3DO95025 777 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 LRATO95237 230 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 AIFM1O95831 613 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 CELA2AP08217 269 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 VIMP08670 466 aaKnown RBP6.1□□□□□ -1.43
CD44-214ENST00000525211 IL3P08700 152 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 ZGLP1P0C6A0 271 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 FAM58BPP0C7Q3 252 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 C8orf89P0DMQ9 161 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 G6PDP11413 515 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 MAOAP21397 527 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 PRPH2P23942 346 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 TIA1P31483 386 aaKnown RBP eCLIP6.1□□□□□ -1.43
CD44-214ENST00000525211 XCR1P46094 333 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
CD44-214ENST00000525211 RAP1GDS1P52306 607 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 ARSFP54793 590 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 AQP5P55064 265 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 MTTPP55157 894 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 NME5P56597 212 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 TAS2R50P59544 299 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 STXBP1P61764 594 aaKnown RBP6.1□□□□□ -1.43
CD44-214ENST00000525211 PHC1P78364 1004 aa6.1□□□□□ -1.43
CD44-214ENST00000525211 DCDP81605 110 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms