RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 DRD5P21918 477 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 TAS2R39P59534 338 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.4□□□□□ -1.07
CSMD1-206ENST00000520002 ZNF574Q6ZN55 896 aaPredicted RBP8.4□□□□□ -1.07
CSMD1-206ENST00000520002 AMZ2Q86W34 360 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 DCP2Q8IU60 420 aaKnown RBP8.4□□□□□ -1.07
CSMD1-206ENST00000520002 OCEL1Q9H607 264 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 CPNE5Q9HCH3 593 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 CPQQ9Y646 472 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 CREBL2O60519 120 aaPredicted RBP8.4□□□□□ -1.07
CSMD1-206ENST00000520002 ITGA10O75578 1167 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 KCNC1P48547 511 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 SEC23BQ15437 767 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.07
CSMD1-206ENST00000520002 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.07
CSMD1-206ENST00000520002 GVINP1Q7Z2Y8 2422 aa8.4□□□□□ -1.07
CSMD1-206ENST00000520002 PRSS44E7EML9 344 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SYN3O14994 580 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TLX3O43711 291 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 CLCN4P51793 760 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 CRISP3P54108 245 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 YBEYP58557 167 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SLBPQ14493 270 aaKnown RBP eCLIP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ZNF705AQ6ZN79 300 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 JAGN1Q8N5M9 183 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 CERS4Q9HA82 394 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 IFT52Q9Y366 437 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 A0A0U1RQK1 487 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SFRP4Q6FHJ7 346 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TATDN1Q6P1N9 297 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 C15orf52Q6ZUT6 534 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 HMGB4Q8WW32 186 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 VPS25Q9BRG1 176 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SEZ6LQ9BYH1 1024 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TTYH3Q9C0H2 523 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 REEP4Q9H6H4 257 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ELOVL2Q9NXB9 296 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TLR6Q9Y2C9 796 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 RIPK3Q9Y572 518 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 WASH3PC4AMC7 463 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 RETP07949 1114 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SNRNP70P08621 437 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 LAG3P18627 525 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SF3B4Q15427 424 aaKnown RBP eCLIP8.39□□□□□ -1.076e-6■■□□□ 11.8
CSMD1-206ENST00000520002 HES5Q5TA89 166 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 KIAA0930Q6ICG6 404 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 C1orf94Q6P1W5 598 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PAMR1Q6UXH9 720 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SLC41A3Q96GZ6 507 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 GPR83Q9NYM4 423 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 XRN1Q8IZH2 1706 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 BORCS7-ASMTA0A0B4J1R7 106 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ENPP2Q13822 863 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PAQR8Q8TEZ7 354 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 HIST1H2AAQ96QV6 131 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 RNF32Q9H0A6 362 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ASH2LQ9UBL3 628 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PIK3C2AO00443 1686 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 NWD2Q9ULI1 1742 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SLC7A4O43246 635 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 HLA-DPB1P04440 258 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 CDK1P06493 297 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 KCNAB2Q13303 367 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 C12orf45Q8N5I9 185 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PNLDC1Q8NA58 520 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 MRIQ9BWK5 157 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ENPP5Q9UJA9 477 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TRPM6Q9BX84 2022 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TEX13CA0A0J9YWL9 993 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 TNFSF12O43508 249 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 BCAS1O75363 584 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 MRPL3P09001 348 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 VITQ6UXI7 678 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 OTOP2Q7RTS6 562 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 SGCDQ92629 289 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 NIT2Q9NQR4 276 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 UBFD1O14562 309 aaKnown RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PRKCAP17252 672 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PNLIPRP1P54315 467 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 FLYWCH1Q4VC44 716 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PRSS55Q6UWB4 352 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ARL14EPQ8N8R7 260 aaPredicted RBP8.39□□□□□ -1.07
CSMD1-206ENST00000520002 NAXEQ8NCW5 288 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 RAD9AQ99638 391 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ACBD6Q9BR61 282 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 NDC1Q9BTX1 674 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PRORSD1PA6NEY8 169 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 B4GAT1O43505 415 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 RAB6AP20340 208 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 CAPN3P20807 821 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 CDH11P55287 796 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ENPP6Q6UWR7 440 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 NFKBIDQ8NI38 313 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 PYCR2Q96C36 320 aa8.39□□□□□ -1.07
CSMD1-206ENST00000520002 ABCG5Q9H222 651 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms