RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 WISP3O95389 354 aaPredicted RBP13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SOX3P41225 446 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 HK2P52789 917 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 KRTAP10-9P60411 292 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 STX4Q12846 297 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TESK1Q15569 626 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 HIST2H2ACQ16777 129 aaPredicted RBP13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 XKR6Q5GH73 641 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 HIST2H2AA3Q6FI13 130 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 OPN5Q6U736 354 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 IL20RBQ6UXL0 311 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 VN1R5Q7Z5H4 357 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PDPRQ8NCN5 879 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 BBOF1Q8ND07 529 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 OR5L2Q8NGL0 311 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 OR5M3Q8NGP4 307 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SGCZQ96LD1 299 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 ALOXE3Q9BYJ1 711 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TTTY12Q9BZ98 90 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 DEFB127Q9H1M4 99 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 COPS7AQ9UBW8 275 aa13.55□□□□□ -0.24
SCARNA20.5-201ENST00000516991 FAM166BA8MTA8 275 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 EFCAB8A8MWE9 144 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 WWP2O00308 870 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TAPBPO15533 448 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PDE9AO76083 593 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 GLSO94925 669 aaPredicted RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TBX6O95947 436 aaPredicted RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 IGHG3P01860 377 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 CCDC166P0CW27 439 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 COX7A2P14406 83 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 MSX1P28360 303 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SERPINB1P30740 379 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 HSPA7P48741 367 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 IRF8Q02556 426 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TFF3Q07654 80 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 DOC2AQ14183 400 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TBCCQ15814 346 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 C16orf47Q6ZP98 133 aaPredicted RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 LRRC70Q7Z2Q7 622 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 FAM109AQ8N4B1 249 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SLC2A12Q8TD20 617 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PTPMT1Q8WUK0 201 aaPredicted RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 UBE2E3Q969T4 207 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SMC6Q96SB8 1091 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 GPR22Q99680 433 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TBCDQ9BTW9 1192 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TRIM31Q9BZY9 425 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 OR8D2Q9GZM6 311 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 IL1RL2Q9HB29 575 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 NPDC1Q9NQX5 325 aaPredicted RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 RYDENQ9NUL5 291 aaKnown RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TRMT1Q9NXH9 659 aaKnown RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 CD274Q9NZQ7 290 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 ZNF490Q9ULM2 529 aaPredicted RBP13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 HRH3Q9Y5N1 445 aa13.54□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SPG11Q96JI7 2443 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 AKAP9Q99996 3911 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PINLYPA6NC86 204 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 C17orf105B2RV13 164 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 NPIPA2E9PIF3 369 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 NPIPA3F8WFD2 350 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TP73O15350 636 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 DYRK3O43781 588 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PRAMEF4O60810 478 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TOXO94900 526 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SCELO95171 688 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 P04436 131 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 STMN1P16949 149 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TNNI3P19429 210 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 CNR1P21554 472 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 ACVR2AP27037 513 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 NUP107P57740 925 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 RNF4P78317 190 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PMPCAQ10713 525 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 TBL3Q12788 808 aaKnown RBP13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 EMC4Q5J8M3 183 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PRAMEF9Q5VWM5 478 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 CREG2Q8IUH2 290 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 DMRTC2Q8IXT2 367 aaPredicted RBP13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 F2RL3Q96RI0 385 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 CPNE1Q99829 537 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 MS4A8Q9BY19 250 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 CAB39LQ9H9S4 337 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 LIN28AQ9H9Z2 209 aaKnown RBP13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PRM3Q9NNZ6 103 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PRDM7Q9NQW5 492 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 SACM1LQ9NTJ5 587 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 KCNN3Q9UGI6 736 aa13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 MTO1Q9Y2Z2 717 aaKnown RBP13.53□□□□□ -0.24
SCARNA20.5-201ENST00000516991 A0A0G2JMM0 328 aa13.52□□□□□ -0.25
SCARNA20.5-201ENST00000516991 A0A1B0GVC2 190 aa13.52□□□□□ -0.25
SCARNA20.5-201ENST00000516991 A0A1W2PPB8 328 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms