RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TMEM151AQ8N4L1 468 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 KIF2BQ8N4N8 673 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 TBC1D19Q8N5T2 526 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 NFAM1Q8NET5 270 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 TRPV3Q8NET8 790 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 M1APQ8TC57 530 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 UBTD2Q8WUN7 234 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 MS4A6EQ96DS6 147 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 WDR34Q96EX3 536 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 ERVK-6Q9BXR3 956 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 MED4Q9NPJ6 270 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 C19orf25Q9UFG5 118 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 CROCCQ5TZA2 2017 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 A0A0G2JN53 185 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 TCRBV16S1A1N1A0A5B0 115 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 WDR91A4D1P6 747 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 TGFBR3LH3BV60 316 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 PRAMEF2O60811 474 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 IMPDH1P20839 514 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 ALDH3A1P30838 453 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 CD96P40200 585 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 HNRNPFP52597 415 aaKnown RBP11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 NAGLUP54802 743 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 SLC26A5P58743 744 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 TUBA3CQ13748 450 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 PCLAFQ15004 111 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 ADPRMQ3LIE5 342 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 LIPMQ5VYY2 423 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 TUBA3EQ6PEY2 450 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 FAM180AQ6UWF9 173 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 BCORP1Q8N888 145 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 MDS2Q8NDY4 140 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 TMEM52Q8NDY8 209 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 ELP5Q8TE02 316 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 DYDC1Q8WWB3 177 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 MAGEB10Q96LZ2 347 aaPredicted RBP11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 QRFPRQ96P65 431 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 SIGLEC12Q96PQ1 595 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 MECRQ9BV79 373 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 HES7Q9BYE0 225 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 EHD1Q9H4M9 534 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 NT5DC2Q9H857 520 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 KCNK13Q9HB14 408 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 OLAHQ9NV23 265 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 GPRC5BQ9NZH0 403 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 SLC5A6Q9Y289 635 aa11.89□□□□□ -0.51
SEC61A1-206ENST00000491668 PRMT3O60678 531 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 TRIM13O60858 407 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 DDAH2O95865 285 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 BPGMP07738 259 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 JAK1P23458 1154 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 SERPINB4P48594 390 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 CCNG1P51959 295 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 SLC18A1P54219 525 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 KCNK10P57789 538 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 OR4D2P58180 307 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 DNAJB13P59910 316 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 NAA20P61599 178 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 AP2B1P63010 937 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 PPP2R2AP63151 447 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 BTN3A2P78410 334 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 PMP22Q01453 160 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 IRF8Q02556 426 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 MPP2Q14168 576 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 DOC2AQ14183 400 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 E2F2Q14209 437 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 INAQ16352 499 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 EXT1Q16394 746 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 HIST2H2ACQ16777 129 aaPredicted RBP11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF678Q5SXM1 525 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 ZNF468Q5VIY5 522 aaPredicted RBP11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 HIST2H2AA3Q6FI13 130 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 NIPAL1Q6NVV3 410 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 QSOX2Q6ZRP7 698 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 GOLGA7Q7Z5G4 137 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 UBE3DQ7Z6J8 389 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 NR4A3Q92570 626 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 GAL3ST3Q96A11 431 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 L3HYPDHQ96EM0 354 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 PTCHD1Q96NR3 888 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 TMEM237Q96Q45 408 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 LPAR4Q99677 370 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 RHBGQ9H310 441 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 ACTR8Q9H981 624 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 CLK4Q9HAZ1 481 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 SEMA4BQ9NPR2 832 aaPredicted RBP11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 PCTPQ9UKL6 214 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 OSGIN2Q9Y236 505 aa11.88□□□□□ -0.51
SEC61A1-206ENST00000491668 BIRC5O15392 142 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 LRRTM2O43300 516 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 ERI3O43414 337 aaKnown RBP11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 CLEC3AO75596 197 aa11.87□□□□□ -0.51
SEC61A1-206ENST00000491668 NEURL1O76050 574 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms