RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PROM1O43490 865 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 ACSL4O60488 711 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 ACRP10323 421 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 ATF6P18850 670 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 CRATP43155 626 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 CASP9P55211 416 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 MEDAGQ5VYS4 303 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 ANGPTL8Q6UXH0 198 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 ATP6V1C2Q8NEY4 427 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 B3GNT2Q9NY97 397 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 DNAJC27Q9NZQ0 273 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 BTNL2Q9UIR0 455 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 CDK2AP1O14519 115 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 SCAMP2O15127 329 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 GASTP01350 101 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 C1SP09871 688 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 XCR1P46094 333 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 MLLT11Q13015 90 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 GANABQ14697 944 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 SF1Q15637 639 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 TOR2AQ5JU69 321 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 CDKL4Q5MAI5 379 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 HSDL2Q6YN16 418 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 NPAS3Q8IXF0 933 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 ZC3HAV1LQ96H79 300 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 CWH43Q9H720 699 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 TRIM45Q9H8W5 580 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 RBFOX1Q9NWB1 397 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 SLC23A1Q9UHI7 598 aa18.49■□□□□ 0.55
SNAPC3-206ENST00000490969 TRAV19A0A0A6YYK7 116 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 SERTM1A2A2V5 107 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 FZD6O60353 706 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 GADD45GO95257 159 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 ACADMP11310 421 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 ETFAP13804 333 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 AOAHP28039 575 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 MAN2A2P49641 1150 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 C21orf58P58505 322 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 NCF4Q15080 339 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 CPTPQ5TA50 214 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 SDE2Q6IQ49 451 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 DDX53Q86TM3 631 aaKnown RBP18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 NANOGP1Q8N7R0 232 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 IL26Q9NPH9 171 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 MCUBQ9NWR8 336 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 CRLS1Q9UJA2 301 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 SNX11Q9Y5W9 270 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 CLCA3PQ9Y6N3 262 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 GABRR3A8MPY1 467 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 TLR4O00206 839 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 POLR2CP19387 275 aaPredicted RBP18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 HMGA2P52926 109 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 ARF5P84085 180 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 COX20Q5RI15 118 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 C22orf42Q6IC83 251 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 C19orf18Q8NEA5 215 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 VPS37AQ8NEZ2 397 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 OMA1Q96E52 524 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 SLC22A14Q9Y267 594 aa18.48■□□□□ 0.55
SNAPC3-206ENST00000490969 MTMR11A4FU01 709 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 SLC6A12P48065 614 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 SLC9A3P48764 834 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 SNRPGP62308 76 aaKnown RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 DUSP4Q13115 394 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 TRIQKQ629K1 86 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 PAQR6Q6TCH4 344 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 UBE2R2Q712K3 238 aaPredicted RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 PROKR2Q8NFJ6 384 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 MARVELD3Q96A59 401 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 HTATIP2Q9BUP3 242 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 ANKRA2Q9H9E1 313 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 NMNAT1Q9HAN9 279 aaPredicted RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 KCTD5Q9NXV2 234 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 VPS29Q9UBQ0 182 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 TMCC3Q9ULS5 477 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 RUVBL1Q9Y265 456 aaKnown RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 TRBV5-4A0A0C4DH59 114 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 FADS2P1A8MWK0 482 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 MYL12BO14950 172 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 HCN1O60741 890 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 CLDN11O75508 207 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 CD160O95971 181 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 CLTBP09497 229 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 SLC2A2P11168 524 aaPredicted RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 MYL12AP19105 171 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 ITPKAP23677 461 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 APEX1P27695 318 aaKnown RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 CHIT1Q13231 466 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 MAB21L1Q13394 359 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 C1DQ13901 141 aaKnown RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 SCARB2Q14108 478 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 ZNF628Q5EBL2 1059 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 CCNJQ5T5M9 372 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 MZT2BQ6NZ67 158 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 C1orf52Q8N6N3 182 aaKnown RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 DUSP18Q8NEJ0 188 aa18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 GEMIN6Q8WXD5 167 aaKnown RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 ZBED6CLQ96FA7 236 aaPredicted RBP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNAPC3-206ENST00000490969 GPATCH2Q9NW75 528 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms