RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NDNFQ8TB73 568 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 NEURL3Q96EH8 262 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 SH3YL1Q96HL8 342 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 COPS4Q9BT78 406 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 PITHD1Q9GZP4 211 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 SLAMF7Q9NQ25 335 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 ACER3Q9NUN7 267 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 PSORS1C1Q9UIG5 152 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 B3GNT3Q9Y2A9 372 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 FAM32AQ9Y421 112 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 TRBC2A0A5B9 178 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 PDPK1O15530 556 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 DDX5P17844 614 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 GSSP48637 474 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 NR1D2Q14995 579 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 HEPACAMQ14CZ8 416 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 FAM180BQ6P0A1 224 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 CEACAM20Q6UY09 585 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 OR9Q2Q8NGE9 314 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 FCGR1BQ92637 280 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 VMP1Q96GC9 406 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 QRFPRQ96P65 431 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 ZNF556Q9HAH1 456 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 A4GALTQ9NPC4 353 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 RHBDL2Q9NX52 303 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 SH3GLB1Q9Y371 365 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
PDLIM7-207ENST00000486828 A0A1W2PPV9 198 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 M0R3G1 203 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 KMOO15229 486 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 GADD45GO95257 159 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 RECKO95980 971 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 LCKP06239 509 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 RHCEP18577 417 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 FCARP24071 287 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 PSMB5P28074 263 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 MANFP55145 182 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 TAS2R38P59533 333 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 VBP1P61758 197 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ZNF846Q147U1 533 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 AGBL4Q5VU57 503 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 EGFLAMQ63HQ2 1017 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 DEPDC4Q8N2C3 294 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 DNAJC22Q8N4W6 341 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 HORMAD2Q8N7B1 307 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 TEX101Q9BY14 249 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 TRPV4Q9HBA0 871 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 NEUROD4Q9HD90 331 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 FKBP14Q9NWM8 211 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 MSRAQ9UJ68 235 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 HCN4Q9Y3Q4 1203 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 C2orf16Q68DN1 1984 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 MYO9BQ13459 2157 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 CLDN24A6NM45 220 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 CLDN25C9JDP6 229 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 H7BY64 318 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 PCDH17O14917 1159 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 CCNB2O95067 398 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 IFNW1P05000 195 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 TGFBR2P37173 567 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 FRKP42685 505 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ALDH9A1P49189 494 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 CLCNKAP51800 687 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ERVK-21P61565 698 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 KCNC4Q03721 635 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 GPM6BQ13491 265 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 RAB30Q15771 203 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 DGUOKQ16854 277 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 NUDT13Q86X67 352 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 CCDC103Q8IW40 242 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 MYDGFQ969H8 173 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ZNF764Q96H86 408 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 PRAP1Q96NZ9 151 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ITPAQ9BY32 194 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ABCG4Q9H172 646 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 LHX9Q9NQ69 397 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ZNF226Q9NYT6 803 aa17.11■□□□□ 0.33
PDLIM7-207ENST00000486828 ARRDC5A6NEK1 342 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 CLCA1A8K7I4 914 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 GPR89AB7ZAQ6 455 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 MID1O15344 667 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 PCDH8O95206 1070 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 GPR89BP0CG08 455 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 GABRB1P18505 474 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 ALDH4A1P30038 563 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 GJA4P35212 333 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 GSTM5P46439 218 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 IDH2P48735 452 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 LSM3P62310 102 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 TBCEQ15813 527 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 DUSP7Q16829 419 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 TANGO2Q6ICL3 276 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 DUS1LQ6P1R4 473 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 IGFN1Q86VF2 1251 aa17.1■□□□□ 0.33
PDLIM7-207ENST00000486828 DENND6BQ8NEG7 585 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms