RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 STMN1P16949 149 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 ATP5A1P25705 553 aaKnown RBP16.73■□□□□ 0.27
ATG4B-221ENST00000483778 ELAVL4P26378 380 aaKnown RBP16.73■□□□□ 0.27
ATG4B-221ENST00000483778 PTGS2P35354 604 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 PTGER4P35408 488 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 GP5P40197 560 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 SOX3P41225 446 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 SSR4P51571 173 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 BMPR2Q13873 1038 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 EFTUD2Q15029 972 aaKnown RBP eCLIP16.73■□□□□ 0.279e-7■■■□□ 14.7
ATG4B-221ENST00000483778 KBTBD12Q3ZCT8 623 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 EMC4Q5J8M3 183 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 CDKL4Q5MAI5 379 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 TCAIMQ8N3R3 496 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 POGLUT1Q8NBL1 392 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 FAM57AQ8TBR7 257 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 ZNF473Q8WTR7 871 aaKnown RBP16.73■□□□□ 0.27
ATG4B-221ENST00000483778 TSPAN17Q96FV3 270 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 VKORC1Q9BQB6 163 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 MS4A8Q9BY19 250 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 CD244Q9BZW8 370 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 PITHD1Q9GZP4 211 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-221ENST00000483778 ALG9Q9H6U8 611 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 RUBCNLQ9H714 662 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 CNOT10Q9H9A5 744 aaKnown RBP16.73■□□□□ 0.27
ATG4B-221ENST00000483778 IGSF5Q9NSI5 407 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 MYOTQ9UBF9 498 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 VTI1BQ9UEU0 232 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 RNF112Q9ULX5 631 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 PPT2Q9UMR5 302 aa16.73■□□□□ 0.27
ATG4B-221ENST00000483778 FAM187AA6NFU0 413 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 WASHC1A8K0Z3 465 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 UBXN8O00124 270 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 PRRG2O14669 202 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 TPOP07202 933 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 SLC35E2BP0CK96 405 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CASP2P42575 452 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 MSH2P43246 934 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 HK2P52789 917 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 RAB10P61026 200 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 ATP6V0D1P61421 351 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 IRF8Q02556 426 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 ELAVL1Q15717 326 aaKnown RBP16.72■□□□□ 0.27
ATG4B-221ENST00000483778 DGAT2L6Q6ZPD8 337 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CYS1Q717R9 158 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 GDF7Q7Z4P5 450 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CD163Q86VB7 1156 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CTAGE3PQ8IX95 158 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 OR4N5Q8IXE1 308 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 C17orf53Q8N3J3 647 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-221ENST00000483778 TMEM132CQ8N3T6 1108 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 PPM1NQ8N819 430 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 ACOT4Q8N9L9 421 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 BBOF1Q8ND07 529 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 SDCCAG3Q96C92 435 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 SEC16BQ96JE7 1060 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 RASL10BQ96S79 203 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CCDC77Q9BR77 488 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 OR8D2Q9GZM6 311 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 RNF14Q9UBS8 474 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 ERVK-11Q9UQG0 969 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 CLCA3PQ9Y6N3 262 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 HIVEP1P15822 2718 aa16.72■□□□□ 0.27
ATG4B-221ENST00000483778 LRRC14BA6NHZ5 514 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 FAM166BA8MTA8 275 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 EIF3HO15372 352 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATG4B-221ENST00000483778 GSTM2P28161 218 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 PLTPP55058 493 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 CALCOCO2Q13137 446 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 E2F2Q14209 437 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 TBCCQ15814 346 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 ZDHHC24Q6UX98 284 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 PSD4Q8NDX1 1056 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 OR2M7Q8NG81 312 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 PHF10Q8WUB8 498 aaKnown RBP16.71■□□□□ 0.27
ATG4B-221ENST00000483778 NXNL1Q96CM4 212 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 ATOH8Q96SQ7 321 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 EFCAB11Q9BUY7 163 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 OR51B5Q9H339 312 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 COPS7BQ9H9Q2 264 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-221ENST00000483778 LYRM4Q9HD34 91 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 TIMMDC1Q9NPL8 285 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 TXNDC16Q9P2K2 825 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 MRPS33Q9Y291 106 aaKnown RBP16.71■□□□□ 0.27
ATG4B-221ENST00000483778 MED13LQ71F56 2210 aa16.71■□□□□ 0.27
ATG4B-221ENST00000483778 ANKRD17O75179 2603 aaKnown RBP16.7■□□□□ 0.26
ATG4B-221ENST00000483778 ARHGAP21Q5T5U3 1957 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 A0A088AWK7 358 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 A8MVJ9 347 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 HRKO00198 91 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 PCNAP12004 261 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 MTHFD2P13995 350 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 TNNI3P19429 210 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 ZNF10P21506 573 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-221ENST00000483778 PPIAP62937 165 aaKnown RBP16.7■□□□□ 0.26
ATG4B-221ENST00000483778 RNF4P78317 190 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 IRF9Q00978 393 aa16.7■□□□□ 0.26
ATG4B-221ENST00000483778 STX4Q12846 297 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms