RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 OR4K3Q96R72 315 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 MCCC1Q96RQ3 725 aaPredicted RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 TUBA1CQ9BQE3 449 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 C1QTNF7Q9BXJ2 289 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 ATP6V1HQ9UI12 483 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 NCKAP1Q9Y2A7 1128 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 DOCK6Q96HP0 2047 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 SBF1O95248 1867 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 HTR3EA5X5Y0 456 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 GFYI3L273 518 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 RPLP0P05388 317 aaKnown RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 HSD3B1P14060 373 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 NPPBP16860 134 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 CD22P20273 847 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 PAICSP22234 425 aaKnown RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 HSD3B2P26439 372 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 SOX9P48436 509 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 ERVK-21P61565 698 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 BTN3A2P78410 334 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 PPP2R2BQ00005 443 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 PIN1Q13526 163 aaPredicted RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 KIAA0040Q15053 153 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 SMU1Q2TAY7 513 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 HNRNPA1L2Q32P51 320 aaKnown RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 RSBN1Q5VWQ0 802 aaPredicted RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 BHLHB9Q6PI77 547 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 SPRED2Q7Z698 418 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 TSPYL5Q86VY4 417 aaPredicted RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 TEX47Q8TBZ9 253 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 IPCEF1Q8WWN9 437 aaPredicted RBP8.74□□□□□ -1.01
CALD1-220ENST00000482470 SLC35B4Q969S0 331 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 MTERF3Q96E29 417 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 CCDC115Q96NT0 180 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 TMEM45AQ9NWC5 275 aa8.74□□□□□ -1.01
CALD1-220ENST00000482470 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 SNTNA6NMZ2 147 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ANHXE9PGG2 379 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 TLR4O00206 839 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 CAPN5O15484 640 aaPredicted RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 FRS3O43559 492 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SLCO2B1O94956 709 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ZNF12P17014 697 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 MMP12P39900 470 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SLC6A12P48065 614 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SLC13A2Q13183 592 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 MAD2L1BPQ15013 274 aaPredicted RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 HENMT1Q5T8I9 393 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 PLEKHM3Q6ZWE6 761 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 WDR53Q7Z5U6 358 aaPredicted RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 C12orf40Q86WS4 652 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 TMC8Q8IU68 726 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 OR4N5Q8IXE1 308 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 IQCF1Q8N6M8 205 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 PLA2G15Q8NCC3 412 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 OR52N2Q8NGI0 321 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ZNF675Q8TD23 568 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ZFP90Q8TF47 636 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 FGF13Q92913 245 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 LYSMD1Q96S90 227 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 MBOAT4Q96T53 435 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 EHD1Q9H4M9 534 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 RC3H2Q9HBD1 1191 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 PAK1IP1Q9NWT1 392 aaPredicted RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 IL20RAQ9UHF4 553 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SLC27A6Q9Y2P4 619 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SPACA6W5XKT8 324 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 DLGAP1O14490 977 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 PRAMEF4O60810 478 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 GPR37L1O60883 481 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ZNF821O75541 412 aaPredicted RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 PSMA1P25786 263 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 GTF2E2P29084 291 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 CNR2P34972 360 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SMIM11AP58511 58 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ISL1P61371 349 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 IL18R1Q13478 541 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 PDZK1Q5T2W1 519 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 PRAMEF9Q5VWM5 478 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 METTL2BQ6P1Q9 378 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 OR13F1Q8NGS4 319 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 SPATA5L1Q9BVQ7 753 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 RBM38Q9H0Z9 239 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 SLC28A3Q9HAS3 691 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 C3orf14Q9HBI5 128 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 KLHL1Q9NR64 748 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 TAS2R16Q9NYV7 291 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 MAT2BQ9NZL9 334 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 TMEM221A6NGB7 291 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 LRRC72A6NJI9 287 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 WASHC1A8K0Z3 465 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 M0R3H8 397 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 AREL1O15033 823 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 TMCC2O75069 709 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 PRKRAO75569 313 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 NR2F6P10588 404 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 TGFBR1P36897 503 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 CLK3P49761 638 aaKnown RBP8.73□□□□□ -1.01
CALD1-220ENST00000482470 NKX3-2P78367 333 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ZNF385BQ569K4 471 aa8.73□□□□□ -1.01
CALD1-220ENST00000482470 ATAT1Q5SQI0 421 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms