RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ATP1A4Q13733 1029 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 SCIMPQ6UWF3 145 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 APLFQ8IW19 511 aaPredicted RBP25.19■■□□□ 1.62
CCM2-211ENST00000478582 ZNF595Q8IYB9 648 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 TMEM102Q8N9M5 508 aaPredicted RBP25.19■■□□□ 1.62
CCM2-211ENST00000478582 RAB3IL1Q8TBN0 382 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 METTL21AQ8WXB1 218 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 PHF11Q9UIL8 331 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 MRPS33Q9Y291 106 aaKnown RBP25.19■■□□□ 1.62
CCM2-211ENST00000478582 MMACHCQ9Y4U1 282 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 ASB4Q9Y574 426 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 SPACA6W5XKT8 324 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 NUP210LQ5VU65 1888 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 BLACEA4D250 179 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 NPIPB8E9PQR5 432 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 ATP8B1O43520 1251 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 PRMT3O60678 531 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 CDC123O75794 336 aaPredicted RBP25.18■■□□□ 1.62
CCM2-211ENST00000478582 HSPA4LO95757 839 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 C8orf89P0DMQ9 161 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 TPP2P29144 1249 aaPredicted RBP25.18■■□□□ 1.62
CCM2-211ENST00000478582 SLC1A6P48664 564 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 HSD17B7P56937 341 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 SH2D4BQ5SQS7 431 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 CYP20A1Q6UW02 462 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 COMMD6Q7Z4G1 85 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 GPR180Q86V85 440 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 OR11G2Q8NGC1 345 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 CSF3RQ99062 836 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 C20orf27Q9GZN8 174 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 PRDM9Q9NQV7 894 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 SIRT5Q9NXA8 310 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 ZDHHC2Q9UIJ5 367 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 CCL27Q9Y4X3 112 aa25.18■■□□□ 1.62
CCM2-211ENST00000478582 PCSK5Q92824 1860 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 OR2W5A6NFC9 320 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 CLDN4O14493 209 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 SLC28A2O43868 658 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 TMPRSS11DO60235 418 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 LYPLA1O75608 230 aaPredicted RBP25.17■■□□□ 1.62
CCM2-211ENST00000478582 KLK1P06870 262 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 FAM58BPP0C7Q3 252 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 ACPPP15309 386 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 RRADP55042 308 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 BTG2P78543 158 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 HMGCS1Q01581 520 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 SPIN4Q56A73 249 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 SCUBE1Q8IWY4 988 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 TRIM42Q8IWZ5 723 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 C1orf52Q8N6N3 182 aaKnown RBP25.17■■□□□ 1.62
CCM2-211ENST00000478582 TMEM52Q8NDY8 209 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 C11orf24Q96F05 449 aaPredicted RBP25.17■■□□□ 1.62
CCM2-211ENST00000478582 FER1L6-AS2Q96M78 137 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 TUBB1Q9H4B7 451 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 HAO1Q9UJM8 370 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 FBXW2Q9UKT8 454 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 RAP2CQ9Y3L5 183 aa25.17■■□□□ 1.62
CCM2-211ENST00000478582 TLN1Q9Y490 2541 aaKnown RBP25.17■■□□□ 1.62
CCM2-211ENST00000478582 IGKV3D-11A0A0A0MRZ8 115 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 TMEM233B4DJY2 109 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 MKRN2OSH3BPM6 223 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 SLC28A1O00337 649 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 SUV39H1O43463 412 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 PROM1O43490 865 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 RSL1D1O76021 490 aaKnown RBP25.16■■□□□ 1.62
CCM2-211ENST00000478582 CPN2P22792 545 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 PRPH2P23942 346 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 HNRNPH2P55795 449 aaKnown RBP25.16■■□□□ 1.62
CCM2-211ENST00000478582 BST1Q10588 318 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 NSDHLQ15738 373 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 FAAH2Q6GMR7 532 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 ANKRD37Q7Z713 158 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 KIRREL3Q8IZU9 778 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 FAM47BQ8NA70 645 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 TWIST2Q8WVJ9 160 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 METTL2AQ96IZ6 378 aaKnown RBP25.16■■□□□ 1.62
CCM2-211ENST00000478582 PTCHD1Q96NR3 888 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 SORT1Q99523 831 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 MESP1Q9BRJ9 268 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 ZNF395Q9H8N7 513 aaPredicted RBP25.16■■□□□ 1.62
CCM2-211ENST00000478582 ZNF71Q9NQZ8 489 aaPredicted RBP25.16■■□□□ 1.62
CCM2-211ENST00000478582 PRTFDC1Q9NRG1 225 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 C19orf25Q9UFG5 118 aaPredicted RBP25.16■■□□□ 1.62
CCM2-211ENST00000478582 FIS1Q9Y3D6 152 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 ATG4BQ9Y4P1 393 aa25.16■■□□□ 1.62
CCM2-211ENST00000478582 BOD1L1Q8NFC6 3051 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 ARGFXA6NJG6 315 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 J3QKU1 62 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 CTNSO60931 367 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 HNRNPFP52597 415 aaKnown RBP25.15■■□□□ 1.62
CCM2-211ENST00000478582 PPP2R2AP63151 447 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 TNFRSF17Q02223 184 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 IMPG1Q17R60 797 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 DCAF10Q5QP82 559 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 CCNYL2Q5T2Q4 361 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 ATG16L1Q676U5 607 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 GALNT18Q6P9A2 607 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 PRICKLE2Q7Z3G6 844 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 C8orf44Q96CB5 159 aa25.15■■□□□ 1.62
CCM2-211ENST00000478582 APIPQ96GX9 242 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms