RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SLC12A3P55017 1021 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SOX8P57073 446 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GABARAPL2P60520 117 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RAB5BP61020 215 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 FOXO4P98177 505 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MBTD1Q05BQ5 628 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PRKAA1Q13131 559 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MAB21L1Q13394 359 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 CAMK2DQ13557 499 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 DAG1Q14118 895 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 DGCR6Q14129 220 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GANABQ14697 944 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NEDD8Q15843 81 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 KCNMB1Q16558 191 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MSMPQ1L6U9 139 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 HSDL1Q3SXM5 330 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC35D3Q5M8T2 416 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RBM48Q5RL73 367 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 HACD4Q5VWC8 232 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 JADE1Q6IE81 842 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC30A6Q6NXT4 461 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 DLEU7Q6UYE1 221 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TRILQ7L0X0 811 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 P4HA3Q7Z4N8 544 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 POLNQ7Z5Q5 900 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RHOT1Q8IXI2 618 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PRSS58Q8IYP2 241 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 C9orf62Q8N4C0 152 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 C1orf52Q8N6N3 182 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 LRRC57Q8N9N7 239 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 POMGNT2Q8NAT1 580 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SYT14Q8NB59 555 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NETO2Q8NC67 525 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 SETD9Q8NE22 299 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 OR10A7Q8NGE5 316 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 OR13J1Q8NGT2 312 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 STOML3Q8TAV4 291 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ITFG1Q8TB96 612 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GLYATL2Q8WU03 294 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ASB11Q8WXH4 323 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ADAMTS14Q8WXS8 1223 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 OTULINQ96BN8 352 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 HRASLS5Q96KN8 279 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 LINC00052Q96N35 136 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TAAR1Q96RJ0 339 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 UHRF1Q96T88 793 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PKP2Q99959 881 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ZSWIM1Q9BR11 485 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 AMNQ9BXJ7 453 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NUAK2Q9H093 628 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 RIBC2Q9H4K1 309 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MRPL47Q9HD33 250 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PARD6AQ9NPB6 346 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PRDM7Q9NQW5 492 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 IMP3Q9NV31 184 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 ARMCX1Q9P291 453 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 PISDQ9UG56 409 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 TRAPPC4Q9Y296 219 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 GOLT1BQ9Y3E0 138 aa5.74□□□□□ -1.49
ECHDC1-215ENST00000475319 MYH8P13535 1937 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 LTN1O94822 1766 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 A0A1B0GW55 424 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 TCP10L2B9ZVM9 353 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 ZNF213O14771 459 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 ADAMDEC1O15204 470 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 INSIG1O15503 277 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 FFAR2O15552 330 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 SLC25A17O43808 307 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 FADS1O60427 444 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 SELENOFO60613 162 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 LYPLA1O75608 230 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 EFEMP2O95967 443 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 GSRP00390 522 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 ALPLP05186 524 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 RPLP2P05387 115 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DUX4L2P0CJ85 424 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DUX4L3P0CJ86 424 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DUX4L4P0CJ87 422 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DUX4L5P0CJ88 424 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DUX4L6P0CJ89 424 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DUX4L7P0CJ90 424 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 CHRM3P20309 590 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 RAB3BP20337 219 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 CPN2P22792 545 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 KLRC1P26715 233 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 ADSSP30520 456 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 RYKP34925 604 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 MPIP34949 423 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 RPL21P46778 160 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 QARSP47897 775 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 MTHFSP49914 203 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 DNA2P51530 1060 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 NUDT6P53370 316 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 CEBPGP53567 150 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 CTSWP56202 376 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 YBEYP58557 167 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 RAB2AP61019 212 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 GTF2BQ00403 316 aa5.73□□□□□ -1.49
ECHDC1-215ENST00000475319 FMO1Q01740 532 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms