RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NDUFS7O75251 213 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CSO75390 466 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 PRAMEF12O95522 483 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 VTNP04004 478 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 PRSS2P07478 247 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ZFYP08048 801 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 INHBAP08476 426 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 FGF2P09038 288 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 RAB40ALP0C0E4 278 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 SBK2P0C263 348 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 SPP1P10451 314 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 SAGP10523 405 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 CPA3P15088 417 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 FERP16591 822 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 GAP43P17677 238 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 POLR2CP19387 275 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 UGT1A1P22309 533 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 PTPN3P26045 913 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 FASLGP48023 281 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 NPBWR1P48145 328 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CSNK1EP49674 416 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 CLK1P49759 484 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 RASSF2P50749 326 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MAPK12P53778 367 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 IST1P53990 364 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 NAGLUP54802 743 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 EVCP57679 992 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 GALK2Q01415 458 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 DSC1Q08554 894 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 GAGE2BQ13066 116 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 LAMB3Q13751 1172 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 DAZAP2Q15038 168 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 RBMS2Q15434 407 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 EFNB3Q15768 340 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 PSMD5Q16401 504 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MEP1BQ16820 701 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 TYSND1Q2T9J0 566 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ZNF284Q2VY69 593 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 KBTBD12Q3ZCT8 623 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 Q4G0T1 1027 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 GAGE2EQ4V326 116 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 HSP90AA5PQ58FG0 334 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 EOGTQ5NDL2 527 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.19□□□□□ -2.06
CALD1-216ENST00000473714 GAGE2AQ6NT46 116 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 C11orf63Q6NUN7 778 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 FUT10Q6P4F1 479 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 KLC3Q6P597 504 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CTR9Q6PD62 1173 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MYO7BQ6PIF6 2116 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ZNF66Q6ZN08 573 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 COLCA1Q6ZS62 124 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 Q6ZSV7 163 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ZNF534Q76KX8 674 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MEPCEQ7L2J0 689 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 ARHGAP22Q7Z5H3 698 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MRPL10Q7Z7H8 261 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 VASH2Q86V25 355 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 AMIGO1Q86WK6 493 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CCDC83Q8IWF9 413 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 RNF113BQ8IZP6 322 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 GBGT1Q8N5D6 347 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 GCSAMQ8N6F7 178 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 EID2Q8N6I1 236 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ARFGAP1Q8N6T3 406 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 UXS1Q8NBZ7 420 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ACVR1CQ8NER5 493 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 LPCAT1Q8NF37 534 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 OR5M8Q8NGP6 311 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MPLKIPQ8TAP9 179 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 LNX1Q8TBB1 728 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 SLC26A7Q8TE54 656 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 SAP25Q8TEE9 199 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 SLC38A5Q8WUX1 472 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CCDC107Q8WV48 283 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 TAF4BQ92750 862 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CORO2AQ92828 525 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 INPP5DQ92835 1189 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 ST6GALNAC6Q969X2 333 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CFAP36Q96G28 342 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 OXNAD1Q96HP4 312 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 GAL3ST4Q96RP7 486 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CSF3RQ99062 836 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 PKP4Q99569 1192 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 CPNE1Q99829 537 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 TRAF4Q9BUZ4 470 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 SF3B5Q9BWJ5 86 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 PRSS22Q9GZN4 317 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MIS12Q9H081 205 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 LSG1Q9H089 658 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 DPAGT1Q9H3H5 408 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 RWDD1Q9H446 243 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 CDH20Q9HBT6 801 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MCCC2Q9HCC0 563 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 TUFT1Q9NNX1 390 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 MMP25Q9NPA2 562 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 GKN1Q9NS71 199 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 PRMT7Q9NVM4 692 aaPredicted RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 TRMT1Q9NXH9 659 aaKnown RBP2.19□□□□□ -2.06
CALD1-216ENST00000473714 GAGE2DQ9UEU5 116 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms