RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZDHHC4Q9NPG8 344 aa16.15■□□□□ 0.18
ACTB-207ENST00000462494 DYRK4Q9NR20 520 aa16.15■□□□□ 0.18
ACTB-207ENST00000462494 INSL6Q9Y581 213 aa16.15■□□□□ 0.18
ACTB-207ENST00000462494 ADH1CP00326 375 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 RPLP0P05388 317 aaKnown RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 RHCEP18577 417 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 HTRA4P83105 476 aaPredicted RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 HSPB3Q12988 150 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 ARMCX4Q5H9R4 360 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 COLEC12Q5KU26 742 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 UNC5DQ6UXZ4 953 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 USP43Q70EL4 1123 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 SLC46A3Q7Z3Q1 461 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 SFTPA1Q8IWL2 248 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 RBM12BQ8IXT5 1001 aaKnown RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 HORMAD2Q8N7B1 307 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 LINC00615Q96LM1 132 aaPredicted RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 CRISPLD2Q9H0B8 497 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 OR52A5Q9H2C5 316 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 NMNAT1Q9HAN9 279 aaPredicted RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 SLAMF7Q9NQ25 335 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 AHSPQ9NZD4 102 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 PLXND1Q9Y4D7 1925 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 FEZF1A0PJY2 475 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 TGM1P22735 817 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 KELP23276 732 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 LIMS1P48059 325 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 KLHL17Q6TDP4 642 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 LCTLQ6UWM7 567 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 PTCHD4Q6ZW05 846 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 C11orf96Q7Z7L8 435 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 C17orf64Q86WR6 236 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 FAM129CQ86XR2 697 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 ADGRF3Q8IZF5 1079 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 TFGQ92734 400 aaPredicted RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 RAB8BQ92930 207 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 CHCHD6Q9BRQ6 235 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 ABCB10Q9NRK6 738 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 CUEDC1Q9NWM3 386 aaPredicted RBP16.14■□□□□ 0.17
ACTB-207ENST00000462494 GPR34Q9UPC5 381 aa16.14■□□□□ 0.17
ACTB-207ENST00000462494 CCDC88CQ9P219 2028 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 KIAA1549LQ6ZVL6 1849 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 TCF20Q9UGU0 1960 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 ADAM23O75077 832 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 RECKO95980 971 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 DDCP20711 480 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CBLP22681 906 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CHMP24386 653 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CD40LGP29965 261 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 UGT2B10P36537 528 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 VASPP50552 380 aaPredicted RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 PPP5CP53041 499 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 LIM2P55344 173 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 PUM1Q14671 1186 aaKnown RBP eCLIP16.13■□□□□ 0.175e-11■■■□□ 17.7
ACTB-207ENST00000462494 HNRNPA1L2Q32P51 320 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 SPDYE7PQ495Y7 208 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 PLEKHG7Q6ZR37 379 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 ZNF765Q7L2R6 523 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 SLC22A16Q86VW1 577 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 MMAAQ8IVH4 418 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 CELF5Q8N6W0 485 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 TMIEQ8NEW7 156 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 SLC38A5Q8WUX1 472 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 RSPRY1Q96DX4 576 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 MMP27Q9H306 513 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 TM7SF3Q9NS93 570 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 SPATA7Q9P0W8 599 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 SLC23A2Q9UGH3 650 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 NINQ8N4C6 2090 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 EDDM13A0A1B0GTR0 161 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 METTL15A6NJ78 407 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 A8MVJ9 347 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CNOT3O75175 753 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 PSMB5P28074 263 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CNR2P34972 360 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 HMGA2P52926 109 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 DPTQ07507 201 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 MED22Q15528 200 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 LEXMQ3ZCV2 418 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 KHDRBS2Q5VWX1 349 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 DSG4Q86SJ6 1040 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 PDZD3Q86UT5 571 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 AMZ2Q86W34 360 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 ANKRD53Q8N9V6 530 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 MINDY2Q8NBR6 621 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CXorf40AQ8TE69 158 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 EXOSC8Q96B26 276 aaKnown RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 FAM210AQ96ND0 272 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 CXXC1Q9P0U4 656 aaPredicted RBP16.13■□□□□ 0.17
ACTB-207ENST00000462494 ZNF229Q9UJW7 825 aa16.13■□□□□ 0.17
ACTB-207ENST00000462494 TRBV4-1A0A0J9YWV2 114 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 FFAR1O14842 300 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 PDPK1O15530 556 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 VEGFDO43915 354 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 ATP6V1G1O75348 118 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 TBX6O95947 436 aaPredicted RBP16.12■□□□□ 0.17
ACTB-207ENST00000462494 RGS6P49758 472 aa16.12■□□□□ 0.17
ACTB-207ENST00000462494 CRISP1P54107 249 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms