RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ACPPP15309 386 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 POLR2CP19387 275 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TGFBR1P36897 503 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 MMP12P39900 470 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 ELAVL3Q14576 367 aaKnown RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SMN1Q16637 294 aaKnown RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TBRG1Q3YBR2 411 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 FAM78AQ5JUQ0 283 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 VITQ6UXI7 678 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 NUDT18Q6ZVK8 323 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 UBE2Q1Q7Z7E8 422 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 FAM217AQ8IXS0 508 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 L3MBTL4Q8NA19 623 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 VWCEQ96DN2 955 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 A0A1W2PP55 124 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TFECO14948 347 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 PI15O43692 258 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 C1GALT1C1LP0DN25 315 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 EN2P19622 333 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 M6PRP20645 277 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 PSMB5P28074 263 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SLC6A12P48065 614 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SLC9A3P48764 834 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 EMX1Q04741 257 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 ERN2Q76MJ5 926 aaKnown RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 CEP68Q76N32 757 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SLC51BQ86UW2 128 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TP53I13Q8NBR0 393 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 PLA2G15Q8NCC3 412 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SETD9Q8NE22 299 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SAMD11Q96NU1 681 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 KXD1Q9BQD3 176 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 PRRG3Q9BZD7 231 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SLA2Q9H6Q3 261 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 FAM120CQ9NX05 1096 aaKnown RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TPRKBQ9Y3C4 175 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 H3BN98 237 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SLC16A5O15375 505 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 SLCO2B1O94956 709 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 MED26O95402 600 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 C1orf105O95561 183 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 VIPP01282 170 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 IL3P08700 152 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TIA1P31483 386 aaKnown RBP eCLIP14.74□□□□□ -0.052e-8■■■■■ 36.7
LMNB1-203ENST00000460265 SYT16Q17RD7 645 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF404Q494X3 552 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 TRIM40Q6P9F5 258 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF438Q7Z4V0 828 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 GPR149Q86SP6 731 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 MMP21Q8N119 569 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 OR8H2Q8N162 312 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 PGBD3Q8N328 593 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 CHDHQ8NE62 594 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-203ENST00000460265 DYNC2LI1Q8TCX1 351 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 UBTD2Q8WUN7 234 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 DTD2Q96FN9 168 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 FZD3Q9NPG1 666 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 PCDHB11Q9Y5F2 797 aa14.74□□□□□ -0.05
LMNB1-203ENST00000460265 CCDC88CQ9P219 2028 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 LOC100506127A0A0U1RQW1 187 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 EDDM13A0A1B0GTR0 161 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 PIPSLA2A3N6 862 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 LINC01553A4QN01 128 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 MOSPD3O75425 235 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 HTR1AP08908 422 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 MNX1P50219 401 aaPredicted RBP14.73□□□□□ -0.05
LMNB1-203ENST00000460265 POU6F2P78424 691 aaPredicted RBP14.73□□□□□ -0.05
LMNB1-203ENST00000460265 IRAK1BP1Q5VVH5 260 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 DPPA4Q7L190 304 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 RAB42Q8N4Z0 105 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 IL17RDQ8NFM7 739 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 CCDC120Q96HB5 630 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 EFCAB11Q9BUY7 163 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 BEX2Q9BXY8 128 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 AMBRA1Q9C0C7 1298 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 MAFFQ9ULX9 164 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 CKAP5Q14008 2032 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 OTOL1A6NHN0 477 aaPredicted RBP14.73□□□□□ -0.05
LMNB1-203ENST00000460265 FAM220BPB1ANY3 271 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 MID1O15344 667 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 GDI1P31150 447 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 SOX9P48436 509 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 PNLIPRP1P54315 467 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 HBA1P69905 142 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF763Q0D2J5 394 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 ERICH5Q6P6B1 374 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF852Q6ZMS4 543 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 SNAPC3Q92966 411 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 OTULINQ96BN8 352 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 OTUB2Q96DC9 234 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 DCSTAMPQ9H295 470 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 EXOSC4Q9NPD3 245 aaKnown RBP14.73□□□□□ -0.05
LMNB1-203ENST00000460265 KLHL20Q9Y2M5 609 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 MICAL3Q7RTP6 2002 aa14.73□□□□□ -0.05
LMNB1-203ENST00000460265 FNDC1Q4ZHG4 1894 aaPredicted RBP14.73□□□□□ -0.05
LMNB1-203ENST00000460265 SCAMP2O15127 329 aaKnown RBP14.72□□□□□ -0.05
LMNB1-203ENST00000460265 MSL3P1P0C860 447 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 PKLRP30613 574 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 SSR2P43308 183 aa14.72□□□□□ -0.05
LMNB1-203ENST00000460265 RFX3P48380 749 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms