RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TUBGCP3Q96CW5 907 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 CSF3RQ99062 836 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 RBCK1Q9BYM8 510 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 VN1R1Q9GZP7 353 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 SEMA3GQ9NS98 782 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 C3orf18Q9UK00 162 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 MKL2Q9ULH7 1088 aa16.83■□□□□ 0.28
FAM239A-203ENST00000456563 MRPS33Q9Y291 106 aaKnown RBP16.83■□□□□ 0.28
FAM239A-203ENST00000456563 GNG14A0A1W2PPG7 69 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 A0A1W2PR48 441 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 IDSB3KWA1 339 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 CLDN4O14493 209 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 SDHDO14521 159 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 B4GALT2O60909 372 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 TGDSO95455 350 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 IGHEP01854 428 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 HEXBP07686 556 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 ANXA4P09525 319 aaPredicted RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 TLX1P31314 330 aaPredicted RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 BUD31P41223 144 aaPredicted RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 RPL38P63173 70 aaKnown RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 MC1RQ01726 317 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 RHAGQ02094 409 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 GALNTL6Q49A17 601 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 MINDY4Q4G0A6 757 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 QSOX2Q6ZRP7 698 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 MAVSQ7Z434 540 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 TMEM52Q8NDY8 209 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 MAELQ96JY0 434 aaKnown RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 PPP1R36Q96LQ0 422 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 EBPLQ9BY08 206 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 AKTIPQ9H8T0 292 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 GIMAP2Q9UG22 337 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 WBP11Q9Y2W2 641 aaKnown RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 MMACHCQ9Y4U1 282 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 POLR3HQ9Y535 204 aaPredicted RBP16.82■□□□□ 0.28
FAM239A-203ENST00000456563 USH1CQ9Y6N9 552 aa16.82■□□□□ 0.28
FAM239A-203ENST00000456563 ZNF891A8MT65 544 aaPredicted RBP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 PCDH17O14917 1159 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 CDC123O75794 336 aaPredicted RBP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 AIFM1O95831 613 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 NR2F6P10588 404 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 ALOX15P16050 662 aaPredicted RBP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 MMP11P24347 488 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 HNRNPFP52597 415 aaKnown RBP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 EFNA3P52797 238 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 UCNP55089 124 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 HSD17B7P56937 341 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 EMX2Q04743 252 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 ZNF763Q0D2J5 394 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 IL10RAQ13651 578 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 UGT8Q16880 541 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 MFSD4BQ5TF39 518 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 C18orf63Q68DL7 685 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 CCDC81Q6ZN84 652 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 SCUBE1Q8IWY4 988 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 ADAMTS17Q8TE56 1095 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 C16orf78Q8WTQ4 265 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 RPF2Q9H7B2 306 aaKnown RBP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 WDR41Q9HAD4 459 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 PRDM9Q9NQV7 894 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 PRTFDC1Q9NRG1 225 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 TEX10Q9NXF1 929 aaPredicted RBP16.81■□□□□ 0.28
FAM239A-203ENST00000456563 DLGAP4Q9Y2H0 992 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 FREM2Q5SZK8 3169 aa16.81■□□□□ 0.28
FAM239A-203ENST00000456563 ASPMQ8IZT6 3477 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 ACACAQ13085 2346 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 URB1O60287 2271 aaKnown RBP16.8■□□□□ 0.28
FAM239A-203ENST00000456563 OR2W5A6NFC9 320 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 PRMT3O60678 531 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 CTNSO60931 367 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 ALOX12BO75342 701 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 LBPP18428 481 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 ITPKBP27987 946 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 MAPK1P28482 360 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 TAS2R50P59544 299 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 BTG2P78543 158 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 MAD2L1Q13257 205 aaPredicted RBP16.8■□□□□ 0.28
FAM239A-203ENST00000456563 NDUFAF5Q5TEU4 345 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 VWA5B1Q5TIE3 1220 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 TMEM205Q6UW68 189 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 EPGNQ6UW88 154 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 RAB43Q86YS6 212 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 PARP9Q8IXQ6 854 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 FNDC5Q8NAU1 212 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 ZSCAN1Q8NBB4 408 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.8■□□□□ 0.28
FAM239A-203ENST00000456563 TANKQ92844 425 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 FAIM2Q9BWQ8 316 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 WDR55Q9H6Y2 383 aaPredicted RBP16.8■□□□□ 0.28
FAM239A-203ENST00000456563 MYNNQ9NPC7 610 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 ASIC5Q9NY37 505 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 ZMIZ1Q9ULJ6 1067 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 PCDHA9Q9Y5H5 950 aa16.8■□□□□ 0.28
FAM239A-203ENST00000456563 IGKV3D-11A0A0A0MRZ8 115 aa16.79■□□□□ 0.28
FAM239A-203ENST00000456563 C1orf226A1L170 272 aa16.79■□□□□ 0.28
FAM239A-203ENST00000456563 NKX2-8O15522 239 aa16.79■□□□□ 0.28
FAM239A-203ENST00000456563 VIMP08670 466 aaKnown RBP16.79■□□□□ 0.28
FAM239A-203ENST00000456563 BCKDHAP12694 445 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms