RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 GPR180Q86V85 440 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 KBTBD2Q8IY47 623 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF843Q8N446 348 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 ANKRD42Q8N9B4 389 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 TSLPQ969D9 159 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 KCNA7Q96RP8 456 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 LPAR4Q99677 370 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 MESP1Q9BRJ9 268 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 MRPL1Q9BYD6 325 aaKnown RBP13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 SLC25A18Q9H1K4 315 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 WDR41Q9HAD4 459 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 GPR83Q9NYM4 423 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 KCMF1Q9P0J7 381 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 ADAM29Q9UKF5 820 aa13.18□□□□□ -0.3
GTF3C3-206ENST00000448539 A0A0A6YYD5 115 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 IGHV3-20A0A0C4DH32 117 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 A0A1W2PQ72 361 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 MASP2O00187 686 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 CYR61O00622 381 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 AZIN1O14977 448 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 BIRC5O15392 142 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 ALPPP05187 535 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 KLK1P06870 262 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 FAM58BPP0C7Q3 252 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 HTR6P50406 440 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 PGDP52209 483 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 EFNA3P52797 238 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 FOXA1P55317 472 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 STX4Q12846 297 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 RAPSNQ13702 412 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 LACTB2Q53H82 288 aaPredicted RBP13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 ARL13AQ5H913 290 aaPredicted RBP13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 CCNYL2Q5T2Q4 361 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 AGBL2Q5U5Z8 902 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 SCIMPQ6UWF3 145 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 COMMD6Q7Z4G1 85 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 CLNKQ7Z7G1 428 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 METTL4Q8N3J2 472 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 C7orf57Q8NEG2 295 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 FDCSPQ8NFU4 85 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 THOC3Q96J01 351 aaKnown RBP13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 CSF3RQ99062 836 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF717Q9BY31 904 aaPredicted RBP13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 LHPPQ9H008 270 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 NECTIN3Q9NQS3 549 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF71Q9NQZ8 489 aaPredicted RBP13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 FIS1Q9Y3D6 152 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 ZNF451Q9Y4E5 1061 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
GTF3C3-206ENST00000448539 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 TMPRSS11DO60235 418 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 CTNSO60931 367 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 CEACAM4O75871 244 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 GBAP04062 536 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 SERPINA7P05543 415 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 CHRNGP07510 517 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 SERPINB3P29508 390 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 PPP2R1BP30154 601 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 MAPK12P53778 367 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 SOX8P57073 446 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 HMGCS1Q01581 520 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 TNFRSF17Q02223 184 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 ACSM2AQ08AH3 577 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 MYBPC3Q14896 1274 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 CHI3L2Q15782 390 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 EXT1Q16394 746 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 SPIN4Q56A73 249 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 VWA5B1Q5TIE3 1220 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 ACSM2BQ68CK6 577 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 CLEC6AQ6EIG7 209 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 TCTN3Q6NUS6 607 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 PAPD4Q6PIY7 484 aaKnown RBP13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 C1orf52Q8N6N3 182 aaKnown RBP13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 TLCD1Q96CP7 247 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 ACPTQ9BZG2 426 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 RPF2Q9H7B2 306 aaKnown RBP13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 PNO1Q9NRX1 252 aaKnown RBP13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 TP53TG5Q9Y2B4 290 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 ATG4BQ9Y4P1 393 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 PCDHGB7Q9Y5F8 929 aa13.16□□□□□ -0.3
GTF3C3-206ENST00000448539 IGKV3D-11A0A0A0MRZ8 115 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 SERTM1A2A2V5 107 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 SLC28A1O00337 649 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 PROM1O43490 865 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 HSPA4LO95757 839 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 IFNA16P05015 189 aa13.15□□□□□ -0.3
GTF3C3-206ENST00000448539 SERPINE1P05121 402 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms