RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 C3P1Q6ZMU1 363 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 MIB1Q86YT6 1006 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 RGL4Q8IZJ4 473 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 PIH1D2Q8WWB5 315 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 ATF6BQ99941 703 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 ZCCHC4Q9H5U6 513 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 RNF19AQ9NV58 838 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 ZMYM5Q9UJ78 669 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 EXO1Q9UQ84 846 aaKnown RBP15.4■□□□□ 0.06
C9orf3-206ENST00000428313 ARL5AQ9Y689 179 aa15.4■□□□□ 0.06
C9orf3-206ENST00000428313 PIRO00625 290 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 GPR171O14626 319 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 SELENOFO60613 162 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 H2AFB1P0C5Y9 115 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 H2AFB2P0C5Z0 115 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 TXNP10599 105 aaKnown RBP15.39■□□□□ 0.05
C9orf3-206ENST00000428313 ITPKAP23677 461 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 FGF9P31371 208 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-206ENST00000428313 CNR2P34972 360 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 CRISP1P54107 249 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 DCDC1P59894 354 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 SPIBQ01892 262 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 ITKQ08881 620 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 OPCMLQ14982 345 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 DCAF4L1Q3SXM0 396 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 USP45Q70EL2 814 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 TAC4Q86UU9 113 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 C7orf57Q8NEG2 295 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 TM9SF4Q92544 642 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 NXPE3Q969Y0 559 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 CXCL16Q9H2A7 254 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 TTYH1Q9H313 450 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-206ENST00000428313 COPZ2Q9P299 210 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 NDRG3Q9UGV2 375 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 SNX11Q9Y5W9 270 aa15.39■□□□□ 0.05
C9orf3-206ENST00000428313 HNRNPCL2B2RXH8 293 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 NDUFS3O75489 264 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 SNAPINO95295 136 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 NMBP08949 121 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 GAAP10253 952 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 BPIP17213 487 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 LCN1P31025 176 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 IRS1P35568 1242 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 CRYBA2P53672 197 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 DSC2Q02487 901 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 RAB41Q5JT25 222 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 HACD4Q5VWC8 232 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 FGD2Q7Z6J4 655 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 RNF180Q86T96 592 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-206ENST00000428313 LILRB2Q8N423 598 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 OR13C4Q8NGS5 318 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 EEF1AKMT1Q8WVE0 214 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 MYO19Q96H55 970 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 GPR20Q99678 358 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 HDHD2Q9H0R4 259 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 DPAGT1Q9H3H5 408 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 ACTR10Q9NZ32 417 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 ARRDC5A6NEK1 342 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 TMEM229AB2RXF0 380 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 HBP1O60381 514 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 C22orf31O95567 290 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 FGF1P05230 155 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 HLA-DPA1P20036 260 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 BTCP35070 178 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 PNPLA4P41247 253 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 CDH12P55289 794 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 DHODHQ02127 395 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 RPL6Q02878 288 aaKnown RBP15.38■□□□□ 0.05
C9orf3-206ENST00000428313 IL10RBQ08334 325 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 PTPRCAPQ14761 206 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 DGKKQ5KSL6 1271 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 USP30Q70CQ3 517 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 KRT74Q7RTS7 529 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 LAPTM4BQ86VI4 370 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 FTMTQ8N4E7 242 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 OR4D10Q8NGI6 311 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 SCRN2Q96FV2 425 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 CXorf58Q96LI9 332 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 MED10Q9BTT4 135 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 ISYNA1Q9NPH2 558 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 UXTQ9UBK9 157 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-206ENST00000428313 NDOR1Q9UHB4 597 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 TRPS1Q9UHF7 1281 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 PPT2Q9UMR5 302 aa15.38■□□□□ 0.05
C9orf3-206ENST00000428313 MANBAO00462 879 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 USP17L7P0C7H9 530 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PEPDP12955 493 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 CTPS1P17812 591 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 RAG2P55895 527 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 MTAPQ13126 283 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 IHHQ14623 411 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 PTPRNQ16849 979 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 CDKL4Q5MAI5 379 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 WASH2PQ6VEQ5 465 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 DBX2Q6ZNG2 339 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 STPG2Q8N412 459 aa15.37■□□□□ 0.05
C9orf3-206ENST00000428313 RTL3Q8N8U3 475 aaKnown RBP15.37■□□□□ 0.05
C9orf3-206ENST00000428313 SIDT2Q8NBJ9 832 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms