RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZSWIM3Q96MP5 696 aa12.79□□□□□ -0.36
USP42-203ENST00000426246 OR4K3Q96R72 315 aa12.79□□□□□ -0.36
USP42-203ENST00000426246 SLC12A9Q9BXP2 914 aa12.79□□□□□ -0.36
USP42-203ENST00000426246 DYRK4Q9NR20 520 aa12.79□□□□□ -0.36
USP42-203ENST00000426246 PCDHGA6Q9Y5G7 932 aa12.79□□□□□ -0.36
USP42-203ENST00000426246 OR1F1O43749 312 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 FZD6O60353 706 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 IFNW1P05000 195 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 C8GP07360 202 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 CA3P07451 260 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 JUPP14923 745 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 DEFA1P59665 94 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 DEFA3P59666 94 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 PTGES3Q15185 160 aaKnown RBP12.78□□□□□ -0.36
USP42-203ENST00000426246 ZNF750Q32MQ0 723 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 C10orf62Q5T681 223 aaPredicted RBP12.78□□□□□ -0.36
USP42-203ENST00000426246 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 DOHHQ9BU89 302 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 C8orf4Q9NR00 106 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 ADAMDEC1O15204 470 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 PCCBP05166 539 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 C7P10643 843 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 IFI30P13284 250 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 MAPK12P53778 367 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 PYDC2Q56P42 97 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 CAPN13Q6MZZ7 669 aaPredicted RBP12.78□□□□□ -0.36
USP42-203ENST00000426246 USP30Q70CQ3 517 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 FIBINQ8TAL6 211 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 DIRAS2Q96HU8 199 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 NEDD4LQ96PU5 975 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 CLN6Q9NWW5 311 aa12.78□□□□□ -0.36
USP42-203ENST00000426246 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 CCNB2O95067 398 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 CDRT1O95170 752 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 HPRP00739 348 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 GASTP01350 101 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 RB1P06400 928 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 FCER2P06734 321 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 CD6P30203 668 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 VIPR2P41587 438 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 RAB8AP61006 207 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 DDI2Q5TDH0 399 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 MACC1Q6ZN28 852 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 ADGRD2Q7Z7M1 963 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 GOLM1Q8NBJ4 401 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 OR5AR1Q8NGP9 310 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 USP7Q93009 1102 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 TMPRSS11EQ9UL52 423 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 RIMKLBQ9ULI2 386 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 NEUROG3Q9Y4Z2 214 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 SPIN1Q9Y657 262 aaPredicted RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 TRBV4-1A0A0J9YWV2 114 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 IDH3BO43837 385 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 ENTPD6O75354 484 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 JRKO75564 520 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 POP7O75817 140 aaKnown RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 CLEC2LP0C7M8 214 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 PCMT1P22061 227 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.36
USP42-203ENST00000426246 SFSWAPQ12872 951 aaKnown RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 C22orf42Q6IC83 251 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 KIAA1161Q6NSJ0 714 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 LRRC70Q7Z2Q7 622 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 PARP16Q8N5Y8 322 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 NLGN4YQ8NFZ3 816 aaPredicted RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 ZNF480Q8WV37 535 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 POLR2J3Q9H1A7 115 aaKnown RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 QPCTLQ9NXS2 382 aa12.77□□□□□ -0.36
USP42-203ENST00000426246 YBX2Q9Y2T7 364 aaKnown RBP12.77□□□□□ -0.36
USP42-203ENST00000426246 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 ZNF701M0R085 212 aaPredicted RBP12.77□□□□□ -0.37
USP42-203ENST00000426246 GNB5O14775 395 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 SCAMP2O15127 329 aaKnown RBP12.77□□□□□ -0.37
USP42-203ENST00000426246 PTPN2P17706 415 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 SNAPC1Q16533 368 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 ARMCX6Q7L4S7 300 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 C17orf62Q9BQA9 187 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 SLC29A3Q9BZD2 475 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 RMI1Q9H9A7 625 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.37
USP42-203ENST00000426246 KIF26AQ9ULI4 1882 aaPredicted RBP12.77□□□□□ -0.37
USP42-203ENST00000426246 TBC1D3BA6NDS4 549 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 POU2F2P09086 479 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 TSPAN19P0C672 248 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
USP42-203ENST00000426246 AVPR1BP47901 424 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 ID2Q02363 134 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 KCNC3Q14003 757 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 ZNF77Q15935 545 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 PDZK1Q5T2W1 519 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 OR2G6Q5TZ20 316 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 KDM4DQ6B0I6 523 aa12.76□□□□□ -0.37
USP42-203ENST00000426246 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms