RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PAGE2BQ5JRK9 111 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 PRAMEF9Q5VWM5 478 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 HIST2H2AA3Q6FI13 130 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 RGS9BPQ6ZS82 235 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 CDH24Q86UP0 819 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 BBOF1Q8ND07 529 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 MORN4Q8NDC4 146 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 SRFBP1Q8NEF9 429 aaKnown RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 OR14A16Q8NHC5 309 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 PTPMT1Q8WUK0 201 aaPredicted RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 KIAA1191Q96A73 305 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 WDR34Q96EX3 536 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 TREX2Q9BQ50 279 aaPredicted RBP13.4□□□□□ -0.26
PAF1-202ENST00000416728 OR8D2Q9GZM6 311 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 LYRM4Q9HD34 91 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 PRDM7Q9NQW5 492 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
PAF1-202ENST00000416728 PDZD2O15018 2839 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 CACNA1CQ13936 2221 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 FAM90A27PA6NNH2 459 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 CCNT2O60583 730 aaKnown RBP13.39□□□□□ -0.27
PAF1-202ENST00000416728 S100BP04271 92 aaPredicted RBP13.39□□□□□ -0.27
PAF1-202ENST00000416728 CD1DP15813 335 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 CD22P20273 847 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 SSTR1P30872 391 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 HK2P52789 917 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 IRF8Q02556 426 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 OR4D1Q15615 310 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 RTL4Q6ZR62 310 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 GK5Q6ZS86 529 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 SLC22A16Q86VW1 577 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 PDPRQ8NCN5 879 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 LILRB4Q8NHJ6 448 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 KRT12Q99456 494 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 GPR22Q99680 433 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 NAPGQ99747 312 aaPredicted RBP13.39□□□□□ -0.27
PAF1-202ENST00000416728 CPNE1Q99829 537 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 TBCDQ9BTW9 1192 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 TTTY12Q9BZ98 90 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 ZDHHC11Q9H8X9 412 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
PAF1-202ENST00000416728 RNF6Q9Y252 685 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 SPACA6W5XKT8 324 aa13.39□□□□□ -0.27
PAF1-202ENST00000416728 F8P00451 2351 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 A0A0G2JMM0 328 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 A0A1W2PPB8 328 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 A0A1W2PRS3 328 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 KIR3DP1A8MWS1 328 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 CXorf49A8MYA2 514 aaPredicted RBP13.38□□□□□ -0.27
PAF1-202ENST00000416728 C17orf105B2RV13 164 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 NPIPA2E9PIF3 369 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 NPIPA3F8WFD2 350 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 G3V3Y1 287 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 LDB3O75112 727 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 GP5P40197 560 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 MSH2P43246 934 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
PAF1-202ENST00000416728 RIPPLY3P57055 190 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 RNF4P78317 190 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 GTF3C1Q12789 2109 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 CBLBQ13191 982 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 CHIT1Q13231 466 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 TBCCQ15814 346 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 ZNF750Q32MQ0 723 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 EMC4Q5J8M3 183 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 NDUFAF5Q5TEU4 345 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 ACAD11Q709F0 780 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 RPRMLQ8N4K4 120 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 ZNF321PQ8N8H1 164 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 ACOT4Q8N9L9 421 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 GOLM1Q8NBJ4 401 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 OR5L2Q8NGL0 311 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 OR5M3Q8NGP4 307 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 OR8K3Q8NH51 312 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 SLC2A12Q8TD20 617 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 EXT2Q93063 718 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 UBE2E3Q969T4 207 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 SCYL1Q96KG9 808 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 SGCZQ96LD1 299 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 RBBP8Q99708 897 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 MAPKAP1Q9BPZ7 522 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 FAM173AQ9BQD7 235 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 UCK2Q9BZX2 261 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 SAYSD1Q9NPB0 183 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 KCNJ16Q9NPI9 418 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 RNF112Q9ULX5 631 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 CCDC168Q8NDH2 2452 aa13.38□□□□□ -0.27
PAF1-202ENST00000416728 TCRBV9S1A1TA0A576 114 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 NKX2-6A6NCS4 301 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 FOXO6A8MYZ6 492 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 COX7A2P14406 83 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 IGFBP2P18065 325 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 EPORP19235 508 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 CNR1P21554 472 aa13.37□□□□□ -0.27
PAF1-202ENST00000416728 HIST1H1TP22492 207 aaPredicted RBP13.37□□□□□ -0.27
PAF1-202ENST00000416728 ATP5A1P25705 553 aaKnown RBP13.37□□□□□ -0.27
PAF1-202ENST00000416728 RAB10P61026 200 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms