RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 Q6ZNX1 250 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 PAQR9Q6ZVX9 377 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 CYP4V2Q6ZWL3 525 aaPredicted RBP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 OR51G2Q8NGK0 314 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 CASTOR1Q8WTX7 329 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCN1B-202ENST00000415950 EFCAB11Q9BUY7 163 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 NUDT15Q9NV35 164 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 UPB1Q9UBR1 384 aa12.41□□□□□ -0.42
SCN1B-202ENST00000415950 LAMP1P11279 417 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 EDNRBP24530 442 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 TGFBR1P36897 503 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 CLCN7P51798 805 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 CLCNKAP51800 687 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 GRK1Q15835 563 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SOWAHCQ53LP3 525 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 KANK2Q63ZY3 851 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 NUDT13Q86X67 352 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SAMD12Q8N8I0 201 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 OR8J3Q8NGG0 315 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 DNAJB8Q8NHS0 232 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 APIPQ96GX9 242 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 MCCC1Q96RQ3 725 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 HDHD5Q9BXW7 423 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 NLE1Q9NVX2 485 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 A0A1B0GVT2 93 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 KANTRA0A1W2PQU2 76 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 RTCAO00442 366 aaKnown RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 EBLN1P0CF75 366 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 ACTR1BP42025 376 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 STK19P49842 368 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 ACTR1AP61163 376 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 AGTRAPQ6RW13 159 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 UMODL1-AS1Q8N2C9 162 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 CYB5D2Q8WUJ1 264 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 DNAJA3Q96EY1 480 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SCLYQ96I15 445 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SRMSQ9H3Y6 488 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 CHMP1AQ9HD42 196 aaPredicted RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 TMEM248Q9NWD8 314 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 PLAGL1Q9UM63 463 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 HCN4Q9Y3Q4 1203 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 CAPN15O75808 1086 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 STOMP27105 288 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 PTGER1P34995 402 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SEC13P55735 322 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SCAPQ12770 1279 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 ADAM15Q13444 863 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SLC25A25Q6KCM7 469 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 THOC6Q86W42 341 aaKnown RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 MFSD6LQ8IWD5 586 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 NPAS3Q8IXF0 933 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 OR6C4Q8NGE1 309 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 SUSD3Q96L08 255 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 P2RX2Q9UBL9 471 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 NOP16Q9Y3C1 178 aaKnown RBP12.4□□□□□ -0.42
SCN1B-202ENST00000415950 ALG5Q9Y673 324 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
SCN1B-202ENST00000415950 A0A0U1RQF3 1178 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 PROM1O43490 865 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 F2P00734 622 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 MRPL3P09001 348 aaKnown RBP12.4□□□□□ -0.43
SCN1B-202ENST00000415950 CAP1Q01518 475 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 GINS1Q14691 196 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 SF3B4Q15427 424 aaKnown RBP eCLIP12.4□□□□□ -0.43
SCN1B-202ENST00000415950 PM20D1Q6GTS8 502 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 VITQ6UXI7 678 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 NLGN4XQ8N0W4 816 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 OR2L8Q8NGY9 312 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 TSPEARQ8WU66 669 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 JSRP1Q96MG2 331 aaPredicted RBP12.4□□□□□ -0.43
SCN1B-202ENST00000415950 PSKH2Q96QS6 385 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF700Q9H0M5 742 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 C5AR2Q9P296 337 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.43
SCN1B-202ENST00000415950 PCDHGB6Q9Y5F9 930 aa12.4□□□□□ -0.43
SCN1B-202ENST00000415950 C8AP07357 584 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 BMP4P12644 408 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 CA5AP35218 305 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 HTR2BP41595 481 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 FXYD6P3P58550 94 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PPIGQ13427 754 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PRAMEF14Q5SWL7 426 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PRAMEF13Q5VWM6 474 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF101Q8IZC7 436 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF548Q8NEK5 533 aaPredicted RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 PROKR2Q8NFJ6 384 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 L3HYPDHQ96EM0 354 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 CAMK1GQ96NX5 476 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 LGR4Q9BXB1 951 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 MRPS30Q9NP92 439 aaKnown RBP12.39□□□□□ -0.43
SCN1B-202ENST00000415950 TAS2R16Q9NYV7 291 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 TAS2R10Q9NYW0 307 aa12.39□□□□□ -0.43
SCN1B-202ENST00000415950 EXTL2Q9UBQ6 330 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms