RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CTHP32929 405 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 BRCC3P46736 316 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SRP9P49458 86 aaKnown RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 ROR1Q01973 937 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 VEPH1Q14D04 833 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 UGT8Q16880 541 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 HKDC1Q2TB90 917 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 LINC00303Q3SY05 128 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 CCSMST1Q4G0I0 132 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 WDR44Q5JSH3 913 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 FAM74A1Q5RGS3 127 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 COX20Q5RI15 118 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 OR4F3Q6IEY1 312 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 VITQ6UXI7 678 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 CDYL2Q8N8U2 506 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 GALNT11Q8NCW6 608 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SLC25A43Q8WUT9 341 aaPredicted RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 STON2Q8WXE9 905 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 CENPNQ96H22 339 aaPredicted RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SPATA13Q96N96 652 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 TRNT1Q96Q11 434 aaKnown RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 HHIPQ96QV1 700 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 IL4I1Q96RQ9 567 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 USB1Q9BQ65 265 aaKnown RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 RAB34Q9BZG1 259 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SEMA4CQ9C0C4 833 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 IPPKQ9H8X2 491 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 ELOVL2Q9NXB9 296 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SEL1LQ9UBV2 794 aa2.96□□□□□ -1.93
RGPD3-202ENST00000409886 SF3B6Q9Y3B4 125 aaKnown RBP2.96□□□□□ -1.93
RGPD3-202ENST00000409886 FASNP49327 2511 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 GSAPA4D1B5 854 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 HEPACAM2A8MVW5 462 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 E9PI62 339 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CACNG3O60359 315 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 SNRPB2P08579 225 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 IFNA8P32881 189 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 GPC1P35052 558 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ABATP80404 500 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 FAPQ12884 760 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 LARS2Q15031 903 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ZBTB6Q15916 424 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CCDC153Q494R4 210 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 XKR7Q5GH72 579 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ZNF678Q5SXM1 525 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 GARNL3Q5VVW2 1013 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 FAM160B1Q5W0V3 765 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 DPY19L3Q6ZPD9 716 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CFAP77Q6ZQR2 320 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 DCP1BQ8IZD4 617 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ZNF740Q8NDX6 193 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ATP6V1C2Q8NEY4 427 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 RNF139Q8WU17 664 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 GPRASP2Q96D09 838 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 BSCL2Q96G97 398 aaPredicted RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ANKRD36BP1Q96IX9 119 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 RIT2Q99578 217 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 SMOQ99835 787 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 KCTD14Q9BQ13 255 aaPredicted RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CNPY3Q9BT09 278 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ZSCAN5AQ9BUG6 496 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 RETREG1Q9H6L5 497 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 EXOSC3Q9NQT5 275 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CTPS2Q9NRF8 586 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ZNF226Q9NYT6 803 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 PCDHB5Q9Y5E4 795 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 PCYT1BQ9Y5K3 369 aaPredicted RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ARL5AQ9Y689 179 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 SLC22A7Q9Y694 548 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 FLNBO75369 2602 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 IGKV6-21A0A0C4DH24 114 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 INO80B-WBP1J3KQ70 363 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 MCF2LO15068 1137 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 GPR42O15529 346 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ADAM11O75078 769 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 SEC22BO75396 215 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 S1PR4O95977 384 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 KRT19P08727 400 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 F8A1P23610 371 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ADRA1BP35368 520 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CRYBB2P43320 205 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 DUSP3P51452 185 aaPredicted RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 WNT3P56703 355 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 NUP107P57740 925 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 B2MP61769 119 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 MRPS21P82921 87 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ELAVL2Q12926 359 aaKnown RBP2.96□□□□□ -1.94
RGPD3-202ENST00000409886 CAMK2DQ13557 499 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 RAB33AQ14088 237 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 SGCAQ16586 387 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 PDSS1Q5T2R2 415 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 LIN9Q5TKA1 542 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 LYPD4Q6UWN0 246 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 ZNF836Q6ZNA1 936 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 KCNMB4Q86W47 210 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 DHFR2Q86XF0 187 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 GPSM1Q86YR5 675 aa2.96□□□□□ -1.94
RGPD3-202ENST00000409886 TBC1D21Q8IYX1 336 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms