RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ADAMTS18Q8TE60 1221 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 UCN3Q969E3 161 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 IP6K3Q96PC2 410 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 PRDM9Q9NQV7 894 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 PRTFDC1Q9NRG1 225 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 LYARQ9NX58 379 aaKnown RBP16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 PHF11Q9UIL8 331 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 FBXL4Q9UKA2 621 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 RAP2CQ9Y3L5 183 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 SPACA6W5XKT8 324 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 USP24Q9UPU5 2620 aa16.16■□□□□ 0.18
PTCHD3P3-201ENST00000403073 LOC102723996A0A087X1L8 192 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 MYOCOSA0A1B0GUC4 107 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 WASHC1A8K0Z3 465 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 CLDN4O14493 209 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 LAMA5O15230 3695 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ATP8B1O43520 1251 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 RGS14O43566 566 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 RPL14P50914 215 aaKnown RBP16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 MAPK12P53778 367 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ACSM2AQ08AH3 577 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 SLC13A2Q13183 592 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ATG16L1Q676U5 607 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ACSM2BQ68CK6 577 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 QSOX2Q6ZRP7 698 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 RIPOR1Q6ZS17 1223 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 SCUBE1Q8IWY4 988 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 TRIM42Q8IWZ5 723 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ZNF595Q8IYB9 648 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 APOBEC4Q8WW27 367 aaKnown RBP16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ZNF75CPQ92670 426 aaPredicted RBP16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 TRIM55Q9BYV6 548 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 ING2Q9H160 280 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 PNPOQ9NVS9 261 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 TEX10Q9NXF1 929 aaPredicted RBP16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 MS4A12Q9NXJ0 267 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 LHX6Q9UPM6 363 aa16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 MRPS33Q9Y291 106 aaKnown RBP16.15■□□□□ 0.18
PTCHD3P3-201ENST00000403073 PCSK5Q92824 1860 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 IGKV3D-11A0A0A0MRZ8 115 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 GLOD5A6NK44 160 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TGFBR3LH3BV60 316 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 CTNSO60931 367 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SNNO75324 88 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SEC22BO75396 215 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SKAP2O75563 359 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 DNAJB5O75953 348 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 RSL1D1O76021 490 aaKnown RBP16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 ITGB2P05107 769 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 CYC1P08574 325 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 COX6A1P12074 109 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TLX1P31314 330 aaPredicted RBP16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 HSD17B7P56937 341 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TNFRSF17Q02223 184 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 LINC00303Q3SY05 128 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SPIN4Q56A73 249 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 DCAF10Q5QP82 559 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 RNF165Q6ZSG1 346 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 NDUFAF7Q7L592 441 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 CPEB2Q7Z5Q1 589 aaKnown RBP16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 OR4N5Q8IXE1 308 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 RAB3IL1Q8TBN0 382 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TM4SF18Q96CE8 201 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 C3orf30Q96M34 536 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 FER1L6-AS2Q96M78 137 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 EBPLQ9BY08 206 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 RPF2Q9H7B2 306 aaKnown RBP16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 THAP1Q9NVV9 213 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 MMACHCQ9Y4U1 282 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 CLDN16Q9Y5I7 305 aa16.14■□□□□ 0.17
PTCHD3P3-201ENST00000403073 CFAP47Q6ZTR5 3102 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SCN3AQ9NY46 2000 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 IGHV1-45A0A0A0MS14 117 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 PCDH17O14917 1159 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 PCDH7O60245 1069 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 LDB3O75112 727 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SEC24DO94855 1032 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SNUPNO95149 360 aaKnown RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 AIFM1O95831 613 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 JUNP05412 331 aaKnown RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 NR1D1P20393 614 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TIA1P31483 386 aaKnown RBP eCLIP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 BUD31P41223 144 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 CCL11P51671 97 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 OR4D2P58180 307 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 RHDQ02161 417 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 ID2Q02363 134 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 ACTN3Q08043 901 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 KIAA0040Q15053 153 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 PCOLCEQ15113 449 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 NR6A1Q15406 480 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 SFT2D3Q587I9 215 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 HSP90B2PQ58FF3 399 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 HOMEZQ8IX15 550 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TMEM102Q8N9M5 508 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 DYDC1Q8WWB3 177 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 TTC9Q92623 222 aa16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 ANKRD9Q96BM1 317 aaPredicted RBP16.13■□□□□ 0.17
PTCHD3P3-201ENST00000403073 C11orf24Q96F05 449 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms