RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TSEN54Q7Z6J9 526 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PARP8Q8N3A8 854 aa16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 MOAP1Q96BY2 351 aa16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 THAP11Q96EK4 314 aa16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 ZNF607Q96SK3 696 aa16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 BARD1Q99728 777 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 LHPPQ9H008 270 aa16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 IMP3Q9NV31 184 aaKnown RBP16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 HCN4Q9Y3Q4 1203 aa16.85■□□□□ 0.29
HLA-DQB1-204ENST00000399084 DIRAS1O95057 198 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FUCA1P04066 466 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 IFNW1P05000 195 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 HTR1AP08908 422 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PCMT1P22061 227 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 CMPK1P30085 196 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 IGFALSP35858 605 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SMIM11AP58511 58 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SLC9A5Q14940 896 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TMEM196Q5HYL7 178 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TMEM64Q6YI46 380 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PRSS48Q7RTY5 328 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 ANKRD13BQ86YJ7 626 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR10G2Q8NGC3 310 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 GAB3Q8WWW8 586 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FCGR1BQ92637 280 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SLC22A18Q96BI1 424 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 KCNC2Q96PR1 638 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 MKRN2Q9H000 416 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PLGRKTQ9HBL7 147 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 LHX9Q9NQ69 397 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PCOLCE2Q9UKZ9 415 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3DA0A087WVF3 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3IA0A087WXS9 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3EA0A087X179 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3KA0A087X1G2 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3FA6NER0 549 aaPredicted RBP16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3LB9A6J9 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TOR1BO14657 336 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SERPINB7O75635 380 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TFPTP0C1Z6 253 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3HP0C7X1 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 AGXTP21549 392 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 LIMS1P48059 325 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PLA2G16P53816 162 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 MRPS21P82921 87 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 IL1RL1Q01638 556 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 RPE65Q16518 533 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PRSS53Q2L4Q9 553 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3GQ6DHY5 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3CQ6IPX1 549 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 C6orf120Q7Z4R8 191 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 UBE3DQ7Z6J8 389 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 B3GNT8Q7Z7M8 397 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 TBC1D3Q8IZP1 549 aaPredicted RBP16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR52E1Q8NGJ3 308 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SFXN5Q8TD22 340 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 RORBQ92753 470 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 OR2M4Q96R27 311 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 FEVQ99581 238 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SPATA5L1Q9BVQ7 753 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SEMA3GQ9NS98 782 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 GPSM3Q9Y4H4 160 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 SNX8Q9Y5X2 465 aa16.84■□□□□ 0.29
HLA-DQB1-204ENST00000399084 PDZK1P1A8MUH7 402 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PTGES3LE9PB15 166 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TNFRSF10CO14798 259 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RGS10O43665 173 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MPZL2O60487 215 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ATE1O95260 518 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 APBB3O95704 486 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DRD1P21728 446 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MATN1P21941 496 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GGT2P36268 569 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SSR2P43308 183 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ALDH9A1P49189 494 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CCT3P49368 545 aaKnown RBP16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CYP4F2P78329 520 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CLCA4Q14CN2 919 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NPTX1Q15818 432 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SPDYE7PQ495Y7 208 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRAMEF8Q5VWM4 474 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRAMEF7Q5VXH5 474 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ZNF605Q86T29 641 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NECTIN4Q96NY8 510 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MAPKAP1Q9BPZ7 522 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SORBS1Q9BX66 1292 aaKnown RBP16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KCND3Q9UK17 655 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RAB23Q9ULC3 237 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KCNK6Q9Y257 313 aa16.83■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FEZF1A0PJY2 475 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TMPRSS11DO60235 418 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LCMT2O60294 686 aaKnown RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NDUFS2O75306 463 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OXSR1O95747 527 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HOXB2P14652 356 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACVR2AP27037 513 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PSMB5P28074 263 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NTSP30990 170 aa16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MAGEA10P43363 369 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RAB15P59190 212 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms