RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZCCHC2Q9C0B9 1178 aaKnown RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 EQTNQ9NQ60 294 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 POFUT2Q9Y2G5 429 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TRBV5-4A0A0C4DH59 114 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 HIDE1A8MVS5 230 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 FGBP02675 491 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 RETP07949 1114 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ITGAMP11215 1152 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CD40LGP29965 261 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 IFNA8P32881 189 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ETV5P41161 510 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SSR2P43308 183 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CD97P48960 835 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 MAPK12P53778 367 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SLC16A1P53985 500 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ITGA1P56199 1179 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PYDC2Q56P42 97 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NXPE4Q6UWF7 544 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 BTLAQ7Z6A9 289 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ENTHD1Q8IYW4 607 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CHPFQ8IZ52 775 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 DTX3Q8N9I9 347 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 FAM83FQ8NEG4 500 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SLC5A11Q8WWX8 675 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NEIL2Q969S2 332 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ARMC5Q96C12 935 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 EFCAB11Q9BUY7 163 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 FN3KQ9H479 309 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM45AQ9NWC5 275 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 MS4A12Q9NXJ0 267 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TAS2R9Q9NYW1 312 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CCL27Q9Y4X3 112 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF891A8MT65 544 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PRR23D1E9PI22 279 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 FAM227AF5H4B4 570 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NDUFS4O43181 175 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SULT1B1O43704 296 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PRAMEF4O60810 478 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 MFN2O95140 757 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PRR23D2P0DMB1 279 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CCL5P13501 91 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 HNMTP50135 292 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TBPL1P62380 186 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 HTRA3P83110 453 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 KCNC3Q14003 757 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 GRIN2CQ14957 1233 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 DHCR24Q15392 516 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PRAMEF9Q5VWM5 478 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 KHDRBS2Q5VWX1 349 aaKnown RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 LAIR1Q6GTX8 287 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ARMC6Q6NXE6 501 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TMC5Q6UXY8 1006 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 MMAAQ8IVH4 418 aaKnown RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 OR5AR1Q8NGP9 310 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 KCNE1BA0A087WTH5 132 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 WWP2O00308 870 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 AQP9O43315 295 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PRSS23O95084 383 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 EPHX1P07099 455 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 RHOP08100 348 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CSF2RAP15509 400 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CD9P21926 228 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TARDBPQ13148 414 aaKnown RBP eCLIP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 C10orf62Q5T681 223 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF57Q68EA5 555 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 LIPIQ6XZB0 460 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NCCRP1Q6ZVX7 275 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 GET4Q7L5D6 327 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TRIM46Q7Z4K8 759 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NANOGNBQ7Z5D8 188 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 FAM129CQ86XR2 697 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 OXR1Q8N573 874 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 RAD51AP1Q96B01 352 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 C12orf66Q96MD2 445 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 TBX5Q99593 518 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SEMA3GQ9NS98 782 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 RLIMQ9NVW2 624 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ALKBH4Q9NXW9 302 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SPIN1Q9Y657 262 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 LAMB2P55268 1798 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 RTTNQ86VV8 2226 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CLCA1A8K7I4 914 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ARHGEF15O94989 841 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 IGFBP1P08833 259 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 EPCAMP16422 314 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 KELP23276 732 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 C21orf33P30042 268 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 IDUAP35475 653 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CAPZA2P47755 286 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ARL4DP49703 201 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 MAP4K2Q12851 820 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CDKN3Q16667 212 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 C9orf64Q5T6V5 341 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 XAF1Q6GPH4 301 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PSRC1Q6PGN9 363 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 AKAP14Q86UN6 197 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SYNPOQ8N3V7 929 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SMG7Q92540 1137 aaKnown RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 COL26A1Q96A83 441 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CRELD1Q96HD1 420 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms