RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HCN1O60741 890 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 HLA-DQA2P01906 255 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 IL3P08700 152 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 PIK3CBP42338 1070 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 STK19P49842 368 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 RBBP4Q09028 425 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 SREBF2Q12772 1141 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 CHST9Q7L1S5 443 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC30A8Q8IWU4 369 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 COQ8BQ96D53 544 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 NECTIN4Q96NY8 510 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 EPYCQ99645 322 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 ENPP4Q9Y6X5 453 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 SH3D21A4FU49 640 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 C2orf78A6NCI8 922 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 J3KTA2 159 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 ARHGAP33O14559 1287 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 PCDH17O14917 1159 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 MAGEA11P43364 429 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 ANKRD54Q6NXT1 300 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 PAMR1Q6UXH9 720 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 TMIGD1Q6UXZ0 262 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 GDPD1Q8N9F7 314 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 DCAF4L2Q8NA75 395 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 RFT1Q96AA3 541 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 FUZQ9BT04 418 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 IRAK3Q9Y616 596 aa12.6□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR2A25A4D2G3 310 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 E7EQ34 232 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 J3QLW9 94 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 WWP2O00308 870 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SCAMP1O15126 338 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 ZNF19P17023 458 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 EPHA2P29317 976 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 VEZF1Q14119 521 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 CTF1Q16619 201 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 BCL2L15Q5TBC7 163 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 NADSYN1Q6IA69 706 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 NCEH1Q6PIU2 408 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SERPINA13PQ6UXR4 307 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 GDPD3Q7L5L3 318 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 FAM220AQ7Z4H9 259 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 RIMKLAQ8IXN7 391 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 CCDC3Q9BQI4 270 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 A0A1W2PPK0 400 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 LYRM1O43325 122 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC10A3P09131 477 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 CHRNB1P11230 501 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 GSTM3P21266 225 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 TLX1P31314 330 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 GATMP50440 423 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 NKX3-2P78367 333 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 CNIH2Q6PI25 160 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SH3RF2Q8TEC5 729 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SECISBP2Q96T21 854 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 MBLAC1A4D2B0 266 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 HHLA1C9JL84 531 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 RTCAO00442 366 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 IFNGP01579 166 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 AMD1P17707 334 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 PGFP49763 221 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 FADDQ13158 208 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SGCGQ13326 291 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 RPS26P11Q5JNZ5 115 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SLC36A4Q6YBV0 504 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 YIPF7Q8N8F6 280 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 SETD6Q8TBK2 473 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 FBXO8Q9NRD0 319 aa12.59□□□□□ -0.39
TRAPPC9-201ENST00000389328 PHLPP1O60346 1717 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 GFRA2O00451 464 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 TSPAN6O43657 245 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 CYP17A1P05093 508 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 ANXA3P12429 323 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRKACBP22694 351 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 DNASE1P24855 282 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 CAV3P56539 151 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 TSPAN5P62079 268 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 DEFA5Q01523 94 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 ARSIQ5FYB1 569 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRAMEF14Q5SWL7 426 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 PRAMEF13Q5VWM6 474 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 FRRS1Q6ZNA5 592 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 MEX3DQ86XN8 651 aaKnown RBP12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 NTMT1Q9BV86 223 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 OR51I1Q9H343 314 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 SRRDQ9UH36 339 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 PLAGL1Q9UM63 463 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 EVPLQ92817 2033 aa12.58□□□□□ -0.39
TRAPPC9-201ENST00000389328 A0A1B0GVC2 190 aa12.58□□□□□ -0.4
TRAPPC9-201ENST00000389328 TBC1D3BA6NDS4 549 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms