RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 REEP5Q00765 189 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 DGCR6Q14129 220 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 PSRC1Q6PGN9 363 aaPredicted RBP14.25□□□□□ -0.13
SCFD2-201ENST00000388940 TMCO5AQ8N6Q1 288 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 MENTQ9BUN1 341 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 ANKHQ9HCJ1 492 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 ZNF226Q9NYT6 803 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 TAC3Q9UHF0 121 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 KCND3Q9UK17 655 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 TDRKHQ9Y2W6 561 aaKnown RBP14.25□□□□□ -0.13
SCFD2-201ENST00000388940 PRKAB1Q9Y478 270 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CAPN5O15484 640 aaPredicted RBP14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CCNB2O95067 398 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 NADKO95544 446 aaPredicted RBP14.25□□□□□ -0.13
SCFD2-201ENST00000388940 RECKO95980 971 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 HNRNPCP07910 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CBLP22681 906 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 UGT2B10P36537 528 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CD97P48960 835 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CCR8P51685 355 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 MAPK12P53778 367 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CDK3Q00526 305 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 ITGADQ13349 1161 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 HEPACAMQ14CZ8 416 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 PIP5KL1Q5T9C9 394 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 HEATR4Q86WZ0 1026 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 CCDC103Q8IW40 242 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 MMP21Q8N119 569 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 ANKRD53Q8N9V6 530 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 OR6Q1Q8NGQ2 317 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 HERVK_113Q902F9 699 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 SMPDL3AQ92484 453 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 TMEM121BQ9BXQ6 578 aaPredicted RBP14.25□□□□□ -0.13
SCFD2-201ENST00000388940 PRSS16Q9NQE7 514 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 PMF1-BGLAPU3KQ54 211 aa14.25□□□□□ -0.13
SCFD2-201ENST00000388940 J3KTA2 159 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 GADD45GO95257 159 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 SLC19A1P41440 591 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 PCBP4P57723 403 aaKnown RBP14.24□□□□□ -0.13
SCFD2-201ENST00000388940 CNTN1Q12860 1018 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 PDGFRLQ15198 375 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 SPRED2Q7Z698 418 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 SFTPA1Q8IWL2 248 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 C2orf73Q8N5S3 287 aaPredicted RBP14.24□□□□□ -0.13
SCFD2-201ENST00000388940 APOBEC4Q8WW27 367 aaKnown RBP14.24□□□□□ -0.13
SCFD2-201ENST00000388940 F2RL3Q96RI0 385 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 MAPKAP1Q9BPZ7 522 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 ACAT2Q9BWD1 397 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 BTBD2Q9BX70 525 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 NEUROD4Q9HD90 331 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 OBP2AQ9NY56 170 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 THAP10Q9P2Z0 257 aaPredicted RBP14.24□□□□□ -0.13
SCFD2-201ENST00000388940 ADAM29Q9UKF5 820 aa14.24□□□□□ -0.13
SCFD2-201ENST00000388940 M0R082 166 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 CACNB4O00305 520 aaPredicted RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 PCDH17O14917 1159 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 PDPK1O15530 556 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 IFNW1P05000 195 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 IL12RB1P42701 662 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 NCS1P62166 190 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 LSM3P62310 102 aaKnown RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 TUBA1BP68363 451 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 FAM46CQ5VWP2 391 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 CEACAM20Q6UY09 585 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 TUBA1AQ71U36 451 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 ADCK1Q86TW2 530 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 SLAMF7Q9NQ25 335 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 TRPV5Q9NQA5 729 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 OSGIN1Q9UJX0 560 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 CCDC88CQ9P219 2028 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 A0A1W2PPV9 198 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 GPR89AB7ZAQ6 455 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 KMOO15229 486 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 GPR89BP0CG08 455 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 C21orf33P30042 268 aaPredicted RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 AGERQ15109 404 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 DUSP7Q16829 419 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 FBXO43Q4G163 708 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 ZNF770Q6IQ21 691 aaPredicted RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 MFSD4AQ8N468 514 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 HORMAD2Q8N7B1 307 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 OR9Q2Q8NGE9 314 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 PSMA8Q8TAA3 256 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 COL21A1Q96P44 957 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 SLIRPQ9GZT3 109 aaKnown RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 CUEDC1Q9NWM3 386 aaPredicted RBP14.23□□□□□ -0.13
SCFD2-201ENST00000388940 SNX8Q9Y5X2 465 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
SCFD2-201ENST00000388940 COL4A3Q01955 1670 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 SH3D21A4FU49 640 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 TBC1D3BA6NDS4 549 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 EFCAB9A8MZ26 197 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 KPNA4O00629 521 aaPredicted RBP14.22□□□□□ -0.13
SCFD2-201ENST00000388940 MPZL2O60487 215 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 PDE9AO76083 593 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 TEAD1P28347 426 aa14.22□□□□□ -0.13
SCFD2-201ENST00000388940 LIPAP38571 399 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms